Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 AL354811.1-201ENST00000610286 706 ntBASIC17.64■□□□□ 0.41
NR1H4Q96RI1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 CICP6-201ENST00000457191 2729 ntBASIC17.64■□□□□ 0.41
NR1H4Q96RI1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 FEM1AP3-201ENST00000403722 1741 ntBASIC17.64■□□□□ 0.41
NR1H4Q96RI1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 AC091799.1-201ENST00000422823 811 ntBASIC17.63■□□□□ 0.41
NR1H4Q96RI1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
NR1H4Q96RI1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 AL513477.1-201ENST00000602865 2407 ntBASIC17.62■□□□□ 0.41
NR1H4Q96RI1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 AC087633.2-202ENST00000565166 1439 ntBASIC17.62■□□□□ 0.41
NR1H4Q96RI1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.62■□□□□ 0.41
NR1H4Q96RI1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms