Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AL357033.4-201ENST00000617703 1807 ntBASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 AC090164.3-201ENST00000610780 2143 ntBASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 SNORA78-201ENST00000459373 127 ntBASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 AC008622.2-201ENST00000617006 1229 ntBASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 MCCD1P1-208ENST00000445732 328 ntBASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MS4A4EQ96PG1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
MS4A4EQ96PG1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MS4A4EQ96PG1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MS4A4EQ96PG1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 AC009113.1-201ENST00000570267 2443 ntBASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 GPAT2P1-201ENST00000444924 1672 ntBASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 KRT17P2-201ENST00000300992 1314 ntBASIC17.45■□□□□ 0.38
MS4A4EQ96PG1 AC073592.3-201ENST00000625118 1834 ntBASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 AC138932.1-201ENST00000534164 6830 ntBASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 AC008556.1-201ENST00000610908 2040 ntBASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 AL023284.2-201ENST00000405850 579 ntBASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms