Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 AP000593.1-201ENST00000393668 712 ntBASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 TSPY7P-201ENST00000431358 1114 ntBASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 FITM1-202ENST00000559294 800 ntBASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 MYLKP1-201ENST00000509077 1580 ntBASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.29■□□□□ 0.52
PDLIM5Q96HC4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 KRT17P2-201ENST00000300992 1314 ntBASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 TSPY17P-201ENST00000450329 467 ntBASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 AL353719.1-201ENST00000566847 864 ntBASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM5Q96HC4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 AC034236.2-201ENST00000606662 1610 ntBASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM5Q96HC4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PDLIM5Q96HC4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDLIM5Q96HC4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDLIM5Q96HC4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDLIM5Q96HC4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PDLIM5Q96HC4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDLIM5Q96HC4 AL354751.1-201ENST00000412768 1863 ntBASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 MIR3180-5-201ENST00000583743 153 ntBASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms