Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 AL512353.2-201ENST00000448759 1962 ntBASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 HLA-A-201ENST00000376802 1334 ntBASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP40Q96DI7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 AP000593.1-201ENST00000393668 712 ntBASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.81■□□□□ 0.28
SNRNP40Q96DI7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 IGHV3-47-201ENST00000425060 335 ntBASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 GPR32P1-201ENST00000601788 811 ntBASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 AC120114.3-201ENST00000611923 658 ntBASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.8■□□□□ 0.28
SNRNP40Q96DI7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms