Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.78■□□□□ 0.12
RTN4IP1Q8WWV3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 AC128676.1-201ENST00000454392 318 ntBASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 AL023875.1-201ENST00000640777 796 ntBASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4IP1Q8WWV3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 AP000997.3-201ENST00000623333 2250 ntBASIC15.77■□□□□ 0.11
RTN4IP1Q8WWV3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 FAM201B-201ENST00000458407 597 ntBASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4IP1Q8WWV3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 KRASP1-201ENST00000407852 552 ntBASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms