Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 AC009078.2-202ENST00000463353 338 ntBASIC14.54□□□□□ -0.08
LINC01006Q8NI28 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 AC074051.2-201ENST00000565115 352 ntBASIC14.54□□□□□ -0.08
LINC01006Q8NI28 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.54□□□□□ -0.08
LINC01006Q8NI28 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 FP475955.4-201ENST00000623131 1990 ntBASIC14.54□□□□□ -0.08
LINC01006Q8NI28 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01006Q8NI28 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 AC233702.3-201ENST00000578656 1387 ntBASIC14.53□□□□□ -0.08
LINC01006Q8NI28 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 IGHGP-201ENST00000390555 1178 ntBASIC14.53□□□□□ -0.08
LINC01006Q8NI28 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 AL160237.2-201ENST00000556165 472 ntBASIC14.53□□□□□ -0.08
LINC01006Q8NI28 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 Z69720.1-201ENST00000601483 472 ntBASIC14.53□□□□□ -0.08
LINC01006Q8NI28 AC104692.2-201ENST00000603054 253 ntBASIC14.53□□□□□ -0.08
LINC01006Q8NI28 AC024563.2-201ENST00000603282 481 ntBASIC14.53□□□□□ -0.08
LINC01006Q8NI28 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC01006Q8NI28 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 LINC00167-201ENST00000530583 1419 ntBASIC14.52□□□□□ -0.08
LINC01006Q8NI28 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01006Q8NI28 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 AC079781.3-201ENST00000449110 356 ntBASIC14.52□□□□□ -0.09
LINC01006Q8NI28 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 GUSBP12-201ENST00000513727 720 ntBASIC14.52□□□□□ -0.09
LINC01006Q8NI28 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 AC009065.1-201ENST00000564055 1225 ntBASIC14.52□□□□□ -0.09
LINC01006Q8NI28 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
LINC01006Q8NI28 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms