Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 AC133552.2-202ENST00000575694 574 ntBASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFWD2Q8NHY2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 AL512625.2-201ENST00000417533 625 ntBASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 AC083906.2-201ENST00000511578 360 ntBASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 AL121832.2-201ENST00000610979 668 ntBASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 AC006557.6-201ENST00000623071 864 ntBASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
RFWD2Q8NHY2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 BX276092.2-201ENST00000417668 665 ntBASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.48■□□□□ 0.55
RFWD2Q8NHY2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 AC090192.1-201ENST00000517740 490 ntBASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 PCDHA12-202ENST00000613593 2588 ntBASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFWD2Q8NHY2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms