Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 AC092720.2-201ENST00000602388 1665 ntBASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 AL353692.3-201ENST00000407031 1396 ntBASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 RN7SL606P-201ENST00000472779 293 ntBASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 AC112482.1-201ENST00000492080 688 ntBASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 AP001269.4-201ENST00000609611 512 ntBASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 KRT8P3-201ENST00000519669 1449 ntBASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 SPCS2P1-201ENST00000561636 679 ntBASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC168Q8NDH2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC168Q8NDH2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.58■□□□□ 0.09
CCDC168Q8NDH2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.58■□□□□ 0.09
CCDC168Q8NDH2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.58■□□□□ 0.09
CCDC168Q8NDH2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.58■□□□□ 0.09
CCDC168Q8NDH2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC168Q8NDH2 AC133561.1-201ENST00000568600 2415 ntBASIC15.58■□□□□ 0.09
CCDC168Q8NDH2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 AC026310.3-201ENST00000625186 2373 ntBASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 AC012640.2-201ENST00000561606 901 ntBASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 AC040169.1-201ENST00000565382 521 ntBASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 MTDHP5-201ENST00000598980 586 ntBASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 AC008735.5-201ENST00000623544 497 ntBASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC168Q8NDH2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC168Q8NDH2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms