Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 ANO7L1-203ENST00000602586 1720 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 SEC1P-202ENST00000473944 940 ntBASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC01555Q8NAE3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 RNF152P1-201ENST00000397754 604 ntBASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 AC140113.3-201ENST00000605663 199 ntBASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 AL031432.5-201ENST00000641059 760 ntBASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.98■□□□□ 0.47
LINC01555Q8NAE3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 TSPY5P-201ENST00000426936 936 ntBASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 KRT18P41-201ENST00000518924 1277 ntBASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 AC120498.9-201ENST00000339021 3867 ntBASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 KRT8P7-201ENST00000533003 1432 ntBASIC17.97■□□□□ 0.47
LINC01555Q8NAE3 KRT8P50-201ENST00000562022 1438 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms