Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.59■□□□□ 0.89
NME8Q8N427 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.59■□□□□ 0.89
NME8Q8N427 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.59■□□□□ 0.89
NME8Q8N427 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.59■□□□□ 0.89
NME8Q8N427 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.59■□□□□ 0.89
NME8Q8N427 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.59■□□□□ 0.89
NME8Q8N427 AC079602.3-201ENST00000623931 403 ntBASIC20.59■□□□□ 0.89
NME8Q8N427 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.59■□□□□ 0.89
NME8Q8N427 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.59■□□□□ 0.89
NME8Q8N427 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.59■□□□□ 0.89
NME8Q8N427 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NME8Q8N427 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.58■□□□□ 0.89
NME8Q8N427 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NME8Q8N427 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NME8Q8N427 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NME8Q8N427 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.58■□□□□ 0.89
NME8Q8N427 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
NME8Q8N427 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NME8Q8N427 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NME8Q8N427 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NME8Q8N427 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
NME8Q8N427 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.58■□□□□ 0.89
NME8Q8N427 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.58■□□□□ 0.89
NME8Q8N427 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NME8Q8N427 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NME8Q8N427 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.58■□□□□ 0.89
NME8Q8N427 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.58■□□□□ 0.89
NME8Q8N427 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.58■□□□□ 0.89
NME8Q8N427 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NME8Q8N427 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
NME8Q8N427 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NME8Q8N427 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NME8Q8N427 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NME8Q8N427 AL391807.1-203ENST00000604392 2365 ntBASIC20.58■□□□□ 0.88
NME8Q8N427 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
NME8Q8N427 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NME8Q8N427 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.58■□□□□ 0.88
NME8Q8N427 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NME8Q8N427 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NME8Q8N427 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NME8Q8N427 AFG3L1P-217ENST00000557444 2447 ntBASIC20.57■□□□□ 0.88
NME8Q8N427 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NME8Q8N427 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NME8Q8N427 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.57■□□□□ 0.88
NME8Q8N427 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NME8Q8N427 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.57■□□□□ 0.88
NME8Q8N427 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NME8Q8N427 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NME8Q8N427 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NME8Q8N427 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NME8Q8N427 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NME8Q8N427 MIR662-201ENST00000384847 95 ntBASIC20.57■□□□□ 0.88
NME8Q8N427 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.57■□□□□ 0.88
NME8Q8N427 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.57■□□□□ 0.88
NME8Q8N427 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
NME8Q8N427 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.57■□□□□ 0.88
NME8Q8N427 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.57■□□□□ 0.88
NME8Q8N427 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.57■□□□□ 0.88
NME8Q8N427 AL136038.4-201ENST00000603606 1261 ntBASIC20.57■□□□□ 0.88
NME8Q8N427 AL121672.3-201ENST00000608644 468 ntBASIC20.57■□□□□ 0.88
NME8Q8N427 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.57■□□□□ 0.88
NME8Q8N427 NPAP1P7-201ENST00000613027 823 ntBASIC20.57■□□□□ 0.88
NME8Q8N427 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.57■□□□□ 0.88
NME8Q8N427 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NME8Q8N427 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
NME8Q8N427 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NME8Q8N427 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.57■□□□□ 0.88
NME8Q8N427 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.57■□□□□ 0.88
NME8Q8N427 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.56■□□□□ 0.88
NME8Q8N427 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
NME8Q8N427 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.56■□□□□ 0.88
NME8Q8N427 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NME8Q8N427 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.56■□□□□ 0.88
NME8Q8N427 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NME8Q8N427 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NME8Q8N427 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NME8Q8N427 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NME8Q8N427 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
NME8Q8N427 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.56■□□□□ 0.88
NME8Q8N427 BX276092.5-203ENST00000456199 560 ntBASIC20.56■□□□□ 0.88
NME8Q8N427 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.56■□□□□ 0.88
NME8Q8N427 MIR3180-4-201ENST00000582223 153 ntBASIC20.56■□□□□ 0.88
NME8Q8N427 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.56■□□□□ 0.88
NME8Q8N427 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.56■□□□□ 0.88
NME8Q8N427 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NME8Q8N427 AC034236.2-201ENST00000606662 1610 ntBASIC20.56■□□□□ 0.88
NME8Q8N427 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.56■□□□□ 0.88
NME8Q8N427 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NME8Q8N427 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 AL162741.1-201ENST00000565563 1558 ntBASIC20.55■□□□□ 0.88
NME8Q8N427 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NME8Q8N427 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NME8Q8N427 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.55■□□□□ 0.88
NME8Q8N427 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms