Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 AL136038.3-201ENST00000561909 1096 ntBASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 GPAT2P1-201ENST00000444924 1672 ntBASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHTF2Q8N3S3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.34■□□□□ 0.69
PHTF2Q8N3S3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.33■□□□□ 0.69
PHTF2Q8N3S3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PHTF2Q8N3S3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHTF2Q8N3S3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PHTF2Q8N3S3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHTF2Q8N3S3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PHTF2Q8N3S3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHTF2Q8N3S3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHTF2Q8N3S3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHTF2Q8N3S3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 SPDYE13P-201ENST00000445314 798 ntBASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHTF2Q8N3S3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 ZNF444P1-201ENST00000559497 298 ntBASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHTF2Q8N3S3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.31■□□□□ 0.68
PHTF2Q8N3S3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PHTF2Q8N3S3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
PHTF2Q8N3S3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PHTF2Q8N3S3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHTF2Q8N3S3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms