Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC104819.1-201ENST00000504587 486 ntBASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 AC079776.4-201ENST00000511039 504 ntBASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 AC138894.3-201ENST00000603787 634 ntBASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 AC010240.3-201ENST00000607688 395 ntBASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 IGHV3-41-201ENST00000613121 348 ntBASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 AC125437.2-201ENST00000625180 2167 ntBASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 RCC2P3-201ENST00000418112 1537 ntBASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEFF1Q8IYR6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
TMEFF1Q8IYR6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEFF1Q8IYR6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEFF1Q8IYR6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.58■□□□□ 0.57
TMEFF1Q8IYR6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TMEFF1Q8IYR6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 AC005332.3-201ENST00000589904 676 ntBASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEFF1Q8IYR6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 AP003733.1-201ENST00000491725 852 ntBASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 AC074051.2-201ENST00000565115 352 ntBASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 LINC00167-201ENST00000530583 1419 ntBASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 AL109659.2-201ENST00000606809 1674 ntBASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEFF1Q8IYR6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 AC104390.1-201ENST00000555663 520 ntBASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 AC090616.6-201ENST00000582640 721 ntBASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 Z82202.1-201ENST00000623446 1880 ntBASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEFF1Q8IYR6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms