Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 ESRRAP1-201ENST00000400596 1257 ntBASIC20.81■□□□□ 0.92
DHX40Q8IX18 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.81■□□□□ 0.92
DHX40Q8IX18 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 KRT8P11-201ENST00000409686 1436 ntBASIC20.8■□□□□ 0.92
DHX40Q8IX18 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 KRT18P29-201ENST00000397031 1267 ntBASIC20.8■□□□□ 0.92
DHX40Q8IX18 POM121L13P-201ENST00000422362 380 ntBASIC20.8■□□□□ 0.92
DHX40Q8IX18 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
DHX40Q8IX18 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DHX40Q8IX18 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 KRT8P45-201ENST00000414328 1447 ntBASIC20.79■□□□□ 0.92
DHX40Q8IX18 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 ITM2C-210ENST00000620962 501 ntBASIC20.79■□□□□ 0.92
DHX40Q8IX18 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DHX40Q8IX18 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
DHX40Q8IX18 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DHX40Q8IX18 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
DHX40Q8IX18 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.78■□□□□ 0.92
DHX40Q8IX18 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms