Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 AC026185.1-201ENST00000445748 174 ntBASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 PNMA6B-201ENST00000538162 1200 ntBASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 AL499627.1-201ENST00000569373 2188 ntBASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUDCD3Q8IVD9 RCC2P6-201ENST00000526625 1557 ntBASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 AC083906.2-201ENST00000511578 360 ntBASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUDCD3Q8IVD9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.58■□□□□ 0.57
NUDCD3Q8IVD9 ESPNP-201ENST00000270691 2015 ntBASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 AC097658.1-201ENST00000475555 843 ntBASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms