Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 AC233263.1-201ENST00000578059 224 ntBASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF3Q8IUI8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 AC005829.2-201ENST00000571422 1056 ntBASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 AC006557.6-201ENST00000623071 864 ntBASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 AC067852.2-201ENST00000590513 2313 ntBASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 PKD1P1-201ENST00000458669 6805 ntBASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.69■□□□□ 0.58
CRLF3Q8IUI8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 AL162741.1-201ENST00000565563 1558 ntBASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 POM121L13P-201ENST00000422362 380 ntBASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 AC069544.1-201ENST00000609399 999 ntBASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.68■□□□□ 0.58
CRLF3Q8IUI8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms