Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP1BQ7LBR1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP1BQ7LBR1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.27■□□□□ 0.35
CHMP1BQ7LBR1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CHMP1BQ7LBR1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CHMP1BQ7LBR1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP1BQ7LBR1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP1BQ7LBR1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP1BQ7LBR1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 MESTP1-201ENST00000404287 994 ntBASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 AC091390.4-202ENST00000476426 537 ntBASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 LINC01568-207ENST00000641790 1380 ntBASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP1BQ7LBR1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 AC128688.1-201ENST00000487626 519 ntBASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 Z85996.1-201ENST00000494644 937 ntBASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 AP005242.2-201ENST00000580065 1175 ntBASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP1BQ7LBR1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 ZNF815P-204ENST00000434898 1737 ntBASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 KRT18P22-201ENST00000402024 1347 ntBASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 AC125437.2-201ENST00000625180 2167 ntBASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 MFAP1P1-201ENST00000442257 1255 ntBASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP1BQ7LBR1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms