Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 TSPY21P-201ENST00000433481 731 ntBASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 AP002982.1-201ENST00000492365 877 ntBASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CDHR3Q6ZTQ4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 CD177P1-201ENST00000606252 935 ntBASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 AL353708.3-201ENST00000610272 989 ntBASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR3Q6ZTQ4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 KRT17P2-201ENST00000300992 1314 ntBASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 FAM197Y1-201ENST00000421178 764 ntBASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 MIR4785-201ENST00000585005 73 ntBASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 AC073195.1-201ENST00000607241 877 ntBASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 HLA-A-209ENST00000638375 975 ntBASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR3Q6ZTQ4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms