Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 AC239809.2-201ENST00000415381 517 ntBASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 LINC01126-201ENST00000623515 1646 ntBASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 NBPF21P-201ENST00000425093 1451 ntBASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 AC233263.1-201ENST00000578059 224 ntBASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 AC004264.1-201ENST00000608354 794 ntBASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 ITM2C-210ENST00000620962 501 ntBASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM53Q6P2H8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 KRASP1-201ENST00000407852 552 ntBASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 RN7SL471P-201ENST00000580476 299 ntBASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM53Q6P2H8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 TUBB8P6-201ENST00000436895 1288 ntBASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 AL023875.1-201ENST00000640777 796 ntBASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms