Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 AC005521.1-201ENST00000393351 872 ntBASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 RCN1P1-201ENST00000400413 996 ntBASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 ATP5G1P1-201ENST00000448724 379 ntBASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 IRX1P1-201ENST00000438849 1838 ntBASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.48■□□□□ 0.71
TTC39BQ5VTQ0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.47■□□□□ 0.71
TTC39BQ5VTQ0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms