Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRIF1Q5T3J3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIF1Q5T3J3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRIF1Q5T3J3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRIF1Q5T3J3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIF1Q5T3J3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LRIF1Q5T3J3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 NIFKP9-201ENST00000419265 221 ntBASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 AC133681.1-201ENST00000465482 601 ntBASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.66■□□□□ 0.42
LRIF1Q5T3J3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 AC067852.2-201ENST00000590513 2313 ntBASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 AC093677.2-201ENST00000600169 1863 ntBASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRIF1Q5T3J3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRIF1Q5T3J3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.64■□□□□ 0.42
LRIF1Q5T3J3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
LRIF1Q5T3J3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 AL355802.2-201ENST00000402069 882 ntBASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 AC091390.4-202ENST00000476426 537 ntBASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 AC124016.1-201ENST00000609552 612 ntBASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 AL353708.3-201ENST00000610272 989 ntBASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms