Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDH1Q08174 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH1Q08174 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH1Q08174 AC090164.3-201ENST00000610780 2143 ntBASIC18.06■□□□□ 0.48
PCDH1Q08174 AL023803.3-201ENST00000615559 522 ntBASIC18.06■□□□□ 0.48
PCDH1Q08174 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH1Q08174 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
PCDH1Q08174 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 AC120498.9-201ENST00000339021 3867 ntBASIC18.05■□□□□ 0.48
PCDH1Q08174 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PCDH1Q08174 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 AL023284.2-201ENST00000405850 579 ntBASIC18.05■□□□□ 0.48
PCDH1Q08174 RBM17P1-201ENST00000453646 1190 ntBASIC18.05■□□□□ 0.48
PCDH1Q08174 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDH1Q08174 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH1Q08174 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH1Q08174 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH1Q08174 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDH1Q08174 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
PCDH1Q08174 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH1Q08174 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PCDH1Q08174 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH1Q08174 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH1Q08174 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH1Q08174 UNC93B2-201ENST00000285383 730 ntBASIC18.04■□□□□ 0.48
PCDH1Q08174 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH1Q08174 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDH1Q08174 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH1Q08174 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH1Q08174 SLC25A1P2-201ENST00000430693 912 ntBASIC18.04■□□□□ 0.48
PCDH1Q08174 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDH1Q08174 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDH1Q08174 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDH1Q08174 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH1Q08174 FITM1-202ENST00000559294 800 ntBASIC18.04■□□□□ 0.48
PCDH1Q08174 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH1Q08174 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDH1Q08174 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDH1Q08174 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDH1Q08174 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDH1Q08174 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCDH1Q08174 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH1Q08174 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDH1Q08174 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDH1Q08174 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDH1Q08174 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 MIR564-202ENST00000385049 94 ntBASIC18.03■□□□□ 0.48
PCDH1Q08174 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDH1Q08174 CRYGFP-201ENST00000418459 633 ntBASIC18.03■□□□□ 0.48
PCDH1Q08174 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH1Q08174 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDH1Q08174 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDH1Q08174 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH1Q08174 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH1Q08174 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH1Q08174 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.03■□□□□ 0.48
PCDH1Q08174 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PCDH1Q08174 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH1Q08174 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PCDH1Q08174 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDH1Q08174 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms