Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AP003071.4-201ENST00000562276 1284 ntBASIC17.78■□□□□ 0.44
RAE1P78406 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.78■□□□□ 0.44
RAE1P78406 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.78■□□□□ 0.44
RAE1P78406 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.78■□□□□ 0.44
RAE1P78406 TMEM191A-211ENST00000637163 1067 ntBASIC17.78■□□□□ 0.44
RAE1P78406 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RAE1P78406 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAE1P78406 AC112777.1-201ENST00000540175 1423 ntBASIC17.78■□□□□ 0.44
RAE1P78406 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAE1P78406 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAE1P78406 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAE1P78406 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.78■□□□□ 0.44
RAE1P78406 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
RAE1P78406 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.77■□□□□ 0.44
RAE1P78406 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.77■□□□□ 0.44
RAE1P78406 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.77■□□□□ 0.44
RAE1P78406 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RAE1P78406 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RAE1P78406 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.77■□□□□ 0.44
RAE1P78406 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RAE1P78406 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RAE1P78406 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.77■□□□□ 0.44
RAE1P78406 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RAE1P78406 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.77■□□□□ 0.44
RAE1P78406 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RAE1P78406 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.77■□□□□ 0.44
RAE1P78406 TSPY7P-201ENST00000431358 1114 ntBASIC17.77■□□□□ 0.44
RAE1P78406 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.77■□□□□ 0.44
RAE1P78406 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.77■□□□□ 0.44
RAE1P78406 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RAE1P78406 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.77■□□□□ 0.44
RAE1P78406 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RAE1P78406 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.77■□□□□ 0.44
RAE1P78406 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RAE1P78406 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAE1P78406 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RAE1P78406 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAE1P78406 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.77■□□□□ 0.43
RAE1P78406 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.77■□□□□ 0.43
RAE1P78406 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.77■□□□□ 0.43
RAE1P78406 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAE1P78406 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.76■□□□□ 0.43
RAE1P78406 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.76■□□□□ 0.43
RAE1P78406 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.76■□□□□ 0.43
RAE1P78406 CA15P1-201ENST00000481698 905 ntBASIC17.76■□□□□ 0.43
RAE1P78406 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.76■□□□□ 0.43
RAE1P78406 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.76■□□□□ 0.43
RAE1P78406 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
RAE1P78406 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAE1P78406 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAE1P78406 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.75■□□□□ 0.43
RAE1P78406 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.75■□□□□ 0.43
RAE1P78406 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAE1P78406 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAE1P78406 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAE1P78406 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAE1P78406 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAE1P78406 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.75■□□□□ 0.43
RAE1P78406 MIR564-202ENST00000385049 94 ntBASIC17.75■□□□□ 0.43
RAE1P78406 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAE1P78406 RBM17P1-201ENST00000453646 1190 ntBASIC17.75■□□□□ 0.43
RAE1P78406 KRT18P41-201ENST00000518924 1277 ntBASIC17.75■□□□□ 0.43
RAE1P78406 AP005242.2-201ENST00000580065 1175 ntBASIC17.75■□□□□ 0.43
RAE1P78406 MIR4674-201ENST00000582457 87 ntBASIC17.75■□□□□ 0.43
RAE1P78406 MYC-208ENST00000641036 567 ntBASIC17.75■□□□□ 0.43
RAE1P78406 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAE1P78406 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAE1P78406 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.75■□□□□ 0.43
RAE1P78406 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
RAE1P78406 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAE1P78406 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAE1P78406 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms