Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN2P57739 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN2P57739 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN2P57739 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN2P57739 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN2P57739 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLDN2P57739 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN2P57739 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN2P57739 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN2P57739 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN2P57739 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN2P57739 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN2P57739 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN2P57739 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN2P57739 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN2P57739 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN2P57739 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN2P57739 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN2P57739 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN2P57739 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLDN2P57739 AL391807.1-203ENST00000604392 2365 ntBASIC18.46■□□□□ 0.55
CLDN2P57739 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN2P57739 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.46■□□□□ 0.55
CLDN2P57739 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN2P57739 AC011498.5-201ENST00000592027 486 ntBASIC18.46■□□□□ 0.55
CLDN2P57739 AL136038.4-201ENST00000603606 1261 ntBASIC18.46■□□□□ 0.55
CLDN2P57739 AC010240.3-201ENST00000607688 395 ntBASIC18.46■□□□□ 0.55
CLDN2P57739 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN2P57739 AC092119.3-201ENST00000612618 583 ntBASIC18.46■□□□□ 0.55
CLDN2P57739 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN2P57739 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN2P57739 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN2P57739 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLDN2P57739 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLDN2P57739 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN2P57739 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN2P57739 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.46■□□□□ 0.54
CLDN2P57739 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN2P57739 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN2P57739 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN2P57739 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN2P57739 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 DUSP5P1-201ENST00000441325 1139 ntBASIC18.45■□□□□ 0.54
CLDN2P57739 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN2P57739 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 KRT126P-201ENST00000549467 1181 ntBASIC18.45■□□□□ 0.54
CLDN2P57739 AC104390.1-201ENST00000555663 520 ntBASIC18.45■□□□□ 0.54
CLDN2P57739 CLEC4GP1-201ENST00000596555 870 ntBASIC18.45■□□□□ 0.54
CLDN2P57739 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN2P57739 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 AC006333.2-201ENST00000607957 2099 ntBASIC18.45■□□□□ 0.54
CLDN2P57739 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN2P57739 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CLDN2P57739 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN2P57739 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN2P57739 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CLDN2P57739 AL162741.1-201ENST00000565563 1558 ntBASIC18.44■□□□□ 0.54
CLDN2P57739 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLDN2P57739 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
CLDN2P57739 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN2P57739 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN2P57739 HLA-F-220ENST00000434407 884 ntBASIC18.44■□□□□ 0.54
CLDN2P57739 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN2P57739 AL121894.2-201ENST00000602977 491 ntBASIC18.44■□□□□ 0.54
CLDN2P57739 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN2P57739 AC012313.10-201ENST00000623509 926 ntBASIC18.44■□□□□ 0.54
CLDN2P57739 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN2P57739 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN2P57739 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN2P57739 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms