Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
FOXG1P55316 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 AC099343.3-201ENST00000605834 2503 ntBASIC16.4■□□□□ 0.22
FOXG1P55316 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.4■□□□□ 0.22
FOXG1P55316 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FOXG1P55316 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
FOXG1P55316 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
FOXG1P55316 RNF152P1-201ENST00000397754 604 ntBASIC16.4■□□□□ 0.22
FOXG1P55316 TSPY5P-201ENST00000426936 936 ntBASIC16.4■□□□□ 0.22
FOXG1P55316 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.4■□□□□ 0.22
FOXG1P55316 KRT18P38-201ENST00000449496 1282 ntBASIC16.4■□□□□ 0.22
FOXG1P55316 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXG1P55316 NEK4P2-201ENST00000580004 1012 ntBASIC16.4■□□□□ 0.22
FOXG1P55316 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.4■□□□□ 0.22
FOXG1P55316 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 AC018445.3-201ENST00000624177 1945 ntBASIC16.4■□□□□ 0.22
FOXG1P55316 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FOXG1P55316 Z98044.1-201ENST00000632503 1764 ntBASIC16.4■□□□□ 0.22
FOXG1P55316 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FOXG1P55316 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXG1P55316 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
FOXG1P55316 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXG1P55316 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
FOXG1P55316 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
FOXG1P55316 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FOXG1P55316 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
FOXG1P55316 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXG1P55316 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXG1P55316 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.39■□□□□ 0.21
FOXG1P55316 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXG1P55316 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.39■□□□□ 0.21
FOXG1P55316 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXG1P55316 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXG1P55316 NTF6B-201ENST00000591913 560 ntBASIC16.39■□□□□ 0.21
FOXG1P55316 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXG1P55316 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
FOXG1P55316 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXG1P55316 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FOXG1P55316 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
FOXG1P55316 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXG1P55316 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FOXG1P55316 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXG1P55316 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
FOXG1P55316 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXG1P55316 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.38■□□□□ 0.21
FOXG1P55316 AC063952.2-201ENST00000498792 1227 ntBASIC16.38■□□□□ 0.21
FOXG1P55316 AC022616.7-201ENST00000525383 220 ntBASIC16.38■□□□□ 0.21
FOXG1P55316 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXG1P55316 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.38■□□□□ 0.21
FOXG1P55316 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXG1P55316 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
FOXG1P55316 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.38■□□□□ 0.21
FOXG1P55316 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
FOXG1P55316 CROCCP3-202ENST00000420820 1947 ntBASIC16.38■□□□□ 0.21
FOXG1P55316 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXG1P55316 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
FOXG1P55316 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXG1P55316 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
FOXG1P55316 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXG1P55316 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXG1P55316 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXG1P55316 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXG1P55316 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXG1P55316 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXG1P55316 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXG1P55316 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FOXG1P55316 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
FOXG1P55316 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXG1P55316 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXG1P55316 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms