Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NCKAP1LP55160 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
NCKAP1LP55160 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1LP55160 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1LP55160 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1LP55160 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1LP55160 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1LP55160 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 KRT8P50-201ENST00000562022 1438 ntBASIC20.47■□□□□ 0.87
NCKAP1LP55160 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 AL499627.1-201ENST00000569373 2188 ntBASIC20.47■□□□□ 0.87
NCKAP1LP55160 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 AC104076.2-201ENST00000448912 469 ntBASIC20.47■□□□□ 0.87
NCKAP1LP55160 SEC1P-202ENST00000473944 940 ntBASIC20.47■□□□□ 0.87
NCKAP1LP55160 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKAP1LP55160 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
NCKAP1LP55160 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 YBX1P2-201ENST00000489612 999 ntBASIC20.46■□□□□ 0.87
NCKAP1LP55160 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 AL441883.1-201ENST00000566170 1045 ntBASIC20.46■□□□□ 0.87
NCKAP1LP55160 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 AC011558.1-201ENST00000623459 338 ntBASIC20.46■□□□□ 0.87
NCKAP1LP55160 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKAP1LP55160 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.46■□□□□ 0.87
NCKAP1LP55160 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.45■□□□□ 0.87
NCKAP1LP55160 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NCKAP1LP55160 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKAP1LP55160 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.45■□□□□ 0.86
NCKAP1LP55160 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.45■□□□□ 0.86
NCKAP1LP55160 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKAP1LP55160 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.45■□□□□ 0.86
NCKAP1LP55160 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKAP1LP55160 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NCKAP1LP55160 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.45■□□□□ 0.86
NCKAP1LP55160 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.45■□□□□ 0.86
NCKAP1LP55160 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.45■□□□□ 0.86
NCKAP1LP55160 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.45■□□□□ 0.86
NCKAP1LP55160 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.45■□□□□ 0.86
NCKAP1LP55160 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCKAP1LP55160 AC104390.1-201ENST00000555663 520 ntBASIC20.45■□□□□ 0.86
NCKAP1LP55160 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.45■□□□□ 0.86
NCKAP1LP55160 GCSHP2-201ENST00000560971 527 ntBASIC20.45■□□□□ 0.86
NCKAP1LP55160 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCKAP1LP55160 AC024243.1-201ENST00000609234 778 ntBASIC20.45■□□□□ 0.86
NCKAP1LP55160 AL031432.5-201ENST00000641059 760 ntBASIC20.45■□□□□ 0.86
NCKAP1LP55160 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCKAP1LP55160 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKAP1LP55160 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms