Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA4P54764 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.01■□□□□ 0.47
EPHA4P54764 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
EPHA4P54764 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.01■□□□□ 0.47
EPHA4P54764 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.01■□□□□ 0.47
EPHA4P54764 AL157888.1-201ENST00000631930 593 ntBASIC18.01■□□□□ 0.47
EPHA4P54764 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA4P54764 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
EPHA4P54764 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
EPHA4P54764 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA4P54764 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA4P54764 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA4P54764 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
EPHA4P54764 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18■□□□□ 0.47
EPHA4P54764 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18■□□□□ 0.47
EPHA4P54764 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 FXN-203ENST00000396366 922 ntTSL 2 BASIC18■□□□□ 0.47
EPHA4P54764 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18■□□□□ 0.47
EPHA4P54764 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18■□□□□ 0.47
EPHA4P54764 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18■□□□□ 0.47
EPHA4P54764 AC010240.3-201ENST00000607688 395 ntBASIC18■□□□□ 0.47
EPHA4P54764 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18■□□□□ 0.47
EPHA4P54764 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18■□□□□ 0.47
EPHA4P54764 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
EPHA4P54764 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18■□□□□ 0.47
EPHA4P54764 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
EPHA4P54764 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
EPHA4P54764 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
EPHA4P54764 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.99■□□□□ 0.47
EPHA4P54764 BX323043.1-201ENST00000641006 1765 ntBASIC17.99■□□□□ 0.47
EPHA4P54764 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.99■□□□□ 0.47
EPHA4P54764 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
EPHA4P54764 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 AC093484.2-201ENST00000580996 2166 ntBASIC17.99■□□□□ 0.47
EPHA4P54764 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.99■□□□□ 0.47
EPHA4P54764 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
EPHA4P54764 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
EPHA4P54764 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
EPHA4P54764 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.99■□□□□ 0.47
EPHA4P54764 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
EPHA4P54764 HLA-F-220ENST00000434407 884 ntBASIC17.99■□□□□ 0.47
EPHA4P54764 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
EPHA4P54764 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.99■□□□□ 0.47
EPHA4P54764 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.99■□□□□ 0.47
EPHA4P54764 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.99■□□□□ 0.47
EPHA4P54764 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.99■□□□□ 0.47
EPHA4P54764 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
EPHA4P54764 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHA4P54764 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.99■□□□□ 0.47
EPHA4P54764 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
EPHA4P54764 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.98■□□□□ 0.47
EPHA4P54764 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
EPHA4P54764 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.98■□□□□ 0.47
EPHA4P54764 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.98■□□□□ 0.47
EPHA4P54764 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.98■□□□□ 0.47
EPHA4P54764 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
EPHA4P54764 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 AL136038.4-201ENST00000603606 1261 ntBASIC17.98■□□□□ 0.47
EPHA4P54764 AC093458.2-201ENST00000623150 629 ntBASIC17.98■□□□□ 0.47
EPHA4P54764 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.98■□□□□ 0.47
EPHA4P54764 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.98■□□□□ 0.47
EPHA4P54764 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHA4P54764 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms