Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS1P54277 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PMS1P54277 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.62■□□□□ 0.89
PMS1P54277 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS1P54277 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.62■□□□□ 0.89
PMS1P54277 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS1P54277 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PMS1P54277 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PMS1P54277 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS1P54277 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PMS1P54277 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS1P54277 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 REXO1L10P-201ENST00000615707 1290 ntBASIC20.61■□□□□ 0.89
PMS1P54277 REXO1L12P-201ENST00000622156 912 ntBASIC20.61■□□□□ 0.89
PMS1P54277 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS1P54277 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PMS1P54277 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS1P54277 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS1P54277 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.6■□□□□ 0.89
PMS1P54277 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.6■□□□□ 0.89
PMS1P54277 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.6■□□□□ 0.89
PMS1P54277 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.6■□□□□ 0.89
PMS1P54277 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.6■□□□□ 0.89
PMS1P54277 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.6■□□□□ 0.89
PMS1P54277 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.6■□□□□ 0.89
PMS1P54277 AL049637.2-201ENST00000641778 930 ntBASIC20.6■□□□□ 0.89
PMS1P54277 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PMS1P54277 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.6■□□□□ 0.89
PMS1P54277 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PMS1P54277 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.6■□□□□ 0.89
PMS1P54277 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
PMS1P54277 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMS1P54277 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
PMS1P54277 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PMS1P54277 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.59■□□□□ 0.89
PMS1P54277 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.59■□□□□ 0.89
PMS1P54277 AC012618.2-201ENST00000428058 849 ntBASIC20.59■□□□□ 0.89
PMS1P54277 MFAP1P1-201ENST00000442257 1255 ntBASIC20.59■□□□□ 0.89
PMS1P54277 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.59■□□□□ 0.89
PMS1P54277 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.59■□□□□ 0.89
PMS1P54277 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
PMS1P54277 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 NOC2LP1-202ENST00000452600 2235 ntBASIC20.59■□□□□ 0.89
PMS1P54277 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS1P54277 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS1P54277 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
PMS1P54277 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.58■□□□□ 0.89
PMS1P54277 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PMS1P54277 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PMS1P54277 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PMS1P54277 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.58■□□□□ 0.89
PMS1P54277 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS1P54277 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS1P54277 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS1P54277 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PMS1P54277 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PMS1P54277 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.58■□□□□ 0.89
PMS1P54277 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PMS1P54277 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.58■□□□□ 0.89
PMS1P54277 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PMS1P54277 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMS1P54277 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.58■□□□□ 0.89
PMS1P54277 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.58■□□□□ 0.89
PMS1P54277 SLC25A1P4-201ENST00000567977 778 ntBASIC20.58■□□□□ 0.89
PMS1P54277 KRT8P45-201ENST00000414328 1447 ntBASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms