Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 HLA-A-201ENST00000376802 1334 ntBASIC16.3■□□□□ 0.2
HCFC1P51610 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HCFC1P51610 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HCFC1P51610 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC1P51610 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HCFC1P51610 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
HCFC1P51610 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.3■□□□□ 0.2
HCFC1P51610 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HCFC1P51610 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.3■□□□□ 0.2
HCFC1P51610 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
HCFC1P51610 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.29■□□□□ 0.2
HCFC1P51610 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.29■□□□□ 0.2
HCFC1P51610 AC010240.3-201ENST00000607688 395 ntBASIC16.29■□□□□ 0.2
HCFC1P51610 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.29■□□□□ 0.2
HCFC1P51610 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.29■□□□□ 0.2
HCFC1P51610 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HCFC1P51610 TEX21P-204ENST00000641479 1693 ntBASIC16.29■□□□□ 0.2
HCFC1P51610 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.29■□□□□ 0.2
HCFC1P51610 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HCFC1P51610 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HCFC1P51610 KRT18P23-201ENST00000435622 1283 ntBASIC16.29■□□□□ 0.2
HCFC1P51610 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.29■□□□□ 0.2
HCFC1P51610 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.29■□□□□ 0.2
HCFC1P51610 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.29■□□□□ 0.2
HCFC1P51610 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.29■□□□□ 0.2
HCFC1P51610 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.29■□□□□ 0.2
HCFC1P51610 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HCFC1P51610 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HCFC1P51610 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1P51610 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.28■□□□□ 0.2
HCFC1P51610 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HCFC1P51610 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HCFC1P51610 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HCFC1P51610 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.28■□□□□ 0.2
HCFC1P51610 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.28■□□□□ 0.2
HCFC1P51610 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.28■□□□□ 0.2
HCFC1P51610 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.28■□□□□ 0.2
HCFC1P51610 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HCFC1P51610 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HCFC1P51610 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.28■□□□□ 0.2
HCFC1P51610 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1P51610 AC099336.1-202ENST00000602961 463 ntBASIC16.28■□□□□ 0.2
HCFC1P51610 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1P51610 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1P51610 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1P51610 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1P51610 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1P51610 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1P51610 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1P51610 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HCFC1P51610 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.27■□□□□ 0.2
HCFC1P51610 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1P51610 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1P51610 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1P51610 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1P51610 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1P51610 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HCFC1P51610 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HCFC1P51610 KRT16P4-201ENST00000453883 522 ntBASIC16.27■□□□□ 0.2
HCFC1P51610 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1P51610 FOSL1P1-201ENST00000511041 816 ntBASIC16.27■□□□□ 0.2
HCFC1P51610 AC106795.1-205ENST00000512851 1056 ntBASIC16.27■□□□□ 0.2
HCFC1P51610 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.27■□□□□ 0.2
HCFC1P51610 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms