Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.47■□□□□ 0.71
FNTAP49354 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.47■□□□□ 0.71
FNTAP49354 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.47■□□□□ 0.71
FNTAP49354 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FNTAP49354 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.47■□□□□ 0.71
FNTAP49354 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FNTAP49354 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
FNTAP49354 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FNTAP49354 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FNTAP49354 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FNTAP49354 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.46■□□□□ 0.71
FNTAP49354 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
FNTAP49354 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.46■□□□□ 0.71
FNTAP49354 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
FNTAP49354 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.46■□□□□ 0.71
FNTAP49354 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.46■□□□□ 0.71
FNTAP49354 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.46■□□□□ 0.71
FNTAP49354 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.46■□□□□ 0.71
FNTAP49354 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.46■□□□□ 0.71
FNTAP49354 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FNTAP49354 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 AL499627.1-201ENST00000569373 2188 ntBASIC19.45■□□□□ 0.7
FNTAP49354 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FNTAP49354 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.45■□□□□ 0.7
FNTAP49354 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.45■□□□□ 0.7
FNTAP49354 Z85996.1-201ENST00000494644 937 ntBASIC19.45■□□□□ 0.7
FNTAP49354 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.45■□□□□ 0.7
FNTAP49354 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.45■□□□□ 0.7
FNTAP49354 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.45■□□□□ 0.7
FNTAP49354 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.45■□□□□ 0.7
FNTAP49354 MYC-208ENST00000641036 567 ntBASIC19.45■□□□□ 0.7
FNTAP49354 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.45■□□□□ 0.7
FNTAP49354 KRT8P32-201ENST00000512863 1461 ntBASIC19.45■□□□□ 0.7
FNTAP49354 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
FNTAP49354 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
FNTAP49354 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FNTAP49354 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
FNTAP49354 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.45■□□□□ 0.7
FNTAP49354 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
FNTAP49354 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.44■□□□□ 0.7
FNTAP49354 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
FNTAP49354 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.44■□□□□ 0.7
FNTAP49354 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.44■□□□□ 0.7
FNTAP49354 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.44■□□□□ 0.7
FNTAP49354 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNTAP49354 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
FNTAP49354 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.44■□□□□ 0.7
FNTAP49354 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
FNTAP49354 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.43■□□□□ 0.7
FNTAP49354 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.43■□□□□ 0.7
FNTAP49354 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
FNTAP49354 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.43■□□□□ 0.7
FNTAP49354 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.43■□□□□ 0.7
FNTAP49354 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.43■□□□□ 0.7
FNTAP49354 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FNTAP49354 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
FNTAP49354 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.43■□□□□ 0.7
FNTAP49354 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FNTAP49354 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 UNC93B5-201ENST00000530315 699 ntBASIC19.43■□□□□ 0.7
FNTAP49354 AC142086.2-201ENST00000569753 217 ntBASIC19.43■□□□□ 0.7
FNTAP49354 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNTAP49354 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms