Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL359736.2-201ENST00000621992 437 ntBASIC19.62■□□□□ 0.73
SLC1A1P43005 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A1P43005 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A1P43005 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC1A1P43005 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
SLC1A1P43005 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
SLC1A1P43005 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC1A1P43005 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SLC1A1P43005 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC1A1P43005 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 AP000692.2-201ENST00000608391 879 ntBASIC19.61■□□□□ 0.73
SLC1A1P43005 FAM197Y4-202ENST00000622692 608 ntBASIC19.61■□□□□ 0.73
SLC1A1P43005 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SLC1A1P43005 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC1A1P43005 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC1A1P43005 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A1P43005 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SLC1A1P43005 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC1A1P43005 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 NOC2LP1-202ENST00000452600 2235 ntBASIC19.6■□□□□ 0.73
SLC1A1P43005 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC1A1P43005 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 AL109659.2-201ENST00000606809 1674 ntBASIC19.6■□□□□ 0.73
SLC1A1P43005 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC1A1P43005 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC1A1P43005 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC1A1P43005 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SLC1A1P43005 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC1A1P43005 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC1A1P43005 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC1A1P43005 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A1P43005 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLC1A1P43005 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC1A1P43005 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC1A1P43005 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC1A1P43005 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC1A1P43005 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLC1A1P43005 FAM201B-201ENST00000458407 597 ntBASIC19.59■□□□□ 0.73
SLC1A1P43005 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC1A1P43005 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC1A1P43005 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC1A1P43005 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC1A1P43005 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SLC1A1P43005 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC1A1P43005 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC1A1P43005 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
SLC1A1P43005 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC1A1P43005 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC1A1P43005 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC1A1P43005 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC1A1P43005 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC1A1P43005 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SLC1A1P43005 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC1A1P43005 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC1A1P43005 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SLC1A1P43005 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC1A1P43005 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A1P43005 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC1A1P43005 MESTP1-201ENST00000404287 994 ntBASIC19.58■□□□□ 0.72
SLC1A1P43005 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.58■□□□□ 0.72
SLC1A1P43005 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SLC1A1P43005 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC1A1P43005 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms