Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPHP41219 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPHP41219 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPHP41219 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPHP41219 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.13■□□□□ 0.97
PRPHP41219 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPHP41219 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPHP41219 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPHP41219 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPHP41219 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPHP41219 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.12■□□□□ 0.97
PRPHP41219 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.12■□□□□ 0.97
PRPHP41219 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPHP41219 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.12■□□□□ 0.97
PRPHP41219 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPHP41219 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRPHP41219 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.12■□□□□ 0.97
PRPHP41219 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.12■□□□□ 0.97
PRPHP41219 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRPHP41219 NAPSB-206ENST00000562112 1266 ntBASIC21.12■□□□□ 0.97
PRPHP41219 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.12■□□□□ 0.97
PRPHP41219 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PRPHP41219 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPHP41219 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.12■□□□□ 0.97
PRPHP41219 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPHP41219 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
PRPHP41219 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.12■□□□□ 0.97
PRPHP41219 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
PRPHP41219 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPHP41219 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRPHP41219 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.11■□□□□ 0.97
PRPHP41219 AC073592.3-201ENST00000625118 1834 ntBASIC21.11■□□□□ 0.97
PRPHP41219 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.11■□□□□ 0.97
PRPHP41219 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.11■□□□□ 0.97
PRPHP41219 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.11■□□□□ 0.97
PRPHP41219 WWOX-216ENST00000569818 525 ntBASIC21.11■□□□□ 0.97
PRPHP41219 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.11■□□□□ 0.97
PRPHP41219 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.11■□□□□ 0.97
PRPHP41219 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPHP41219 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PRPHP41219 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.1■□□□□ 0.97
PRPHP41219 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PRPHP41219 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.1■□□□□ 0.97
PRPHP41219 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.1■□□□□ 0.97
PRPHP41219 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.1■□□□□ 0.97
PRPHP41219 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 AL499627.1-201ENST00000569373 2188 ntBASIC21.1■□□□□ 0.97
PRPHP41219 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.1■□□□□ 0.97
PRPHP41219 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRPHP41219 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PRPHP41219 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 AC034236.2-201ENST00000606662 1610 ntBASIC21.09■□□□□ 0.97
PRPHP41219 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PRPHP41219 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.09■□□□□ 0.97
PRPHP41219 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.09■□□□□ 0.97
PRPHP41219 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.09■□□□□ 0.97
PRPHP41219 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PRPHP41219 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 AC128688.1-201ENST00000487626 519 ntBASIC21.09■□□□□ 0.97
PRPHP41219 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.09■□□□□ 0.97
PRPHP41219 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.09■□□□□ 0.97
PRPHP41219 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.09■□□□□ 0.97
PRPHP41219 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PRPHP41219 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.09■□□□□ 0.97
PRPHP41219 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
PRPHP41219 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRPHP41219 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms