Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RPA3P35244 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.93■□□□□ 0.62
RPA3P35244 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RPA3P35244 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.93■□□□□ 0.62
RPA3P35244 AC133681.1-201ENST00000465482 601 ntBASIC18.93■□□□□ 0.62
RPA3P35244 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RPA3P35244 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.93■□□□□ 0.62
RPA3P35244 AC142381.4-202ENST00000563973 229 ntBASIC18.93■□□□□ 0.62
RPA3P35244 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.93■□□□□ 0.62
RPA3P35244 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.93■□□□□ 0.62
RPA3P35244 AC110285.5-201ENST00000611501 352 ntBASIC18.93■□□□□ 0.62
RPA3P35244 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RPA3P35244 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RPA3P35244 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
RPA3P35244 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPA3P35244 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.93■□□□□ 0.62
RPA3P35244 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RPA3P35244 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RPA3P35244 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.93■□□□□ 0.62
RPA3P35244 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.93■□□□□ 0.62
RPA3P35244 AC008764.6-201ENST00000595909 2069 ntBASIC18.93■□□□□ 0.62
RPA3P35244 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.92■□□□□ 0.62
RPA3P35244 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.92■□□□□ 0.62
RPA3P35244 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RPA3P35244 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPA3P35244 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPA3P35244 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPA3P35244 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RPA3P35244 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.92■□□□□ 0.62
RPA3P35244 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RPA3P35244 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPA3P35244 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPA3P35244 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RPA3P35244 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.92■□□□□ 0.62
RPA3P35244 TUBB8P6-201ENST00000436895 1288 ntBASIC18.92■□□□□ 0.62
RPA3P35244 AL158047.1-201ENST00000445918 881 ntBASIC18.92■□□□□ 0.62
RPA3P35244 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPA3P35244 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.92■□□□□ 0.62
RPA3P35244 AL359736.2-201ENST00000621992 437 ntBASIC18.92■□□□□ 0.62
RPA3P35244 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RPA3P35244 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPA3P35244 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPA3P35244 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RPA3P35244 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.92■□□□□ 0.62
RPA3P35244 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPA3P35244 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPA3P35244 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RPA3P35244 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RPA3P35244 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.91■□□□□ 0.62
RPA3P35244 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.91■□□□□ 0.62
RPA3P35244 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RPA3P35244 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.91■□□□□ 0.62
RPA3P35244 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.91■□□□□ 0.62
RPA3P35244 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.91■□□□□ 0.62
RPA3P35244 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 KRT18P16-201ENST00000510337 1294 ntBASIC18.91■□□□□ 0.62
RPA3P35244 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.91■□□□□ 0.62
RPA3P35244 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.91■□□□□ 0.62
RPA3P35244 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPA3P35244 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.91■□□□□ 0.62
RPA3P35244 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPA3P35244 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPA3P35244 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPA3P35244 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPA3P35244 AL162741.1-201ENST00000565563 1558 ntBASIC18.9■□□□□ 0.62
RPA3P35244 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.9■□□□□ 0.62
RPA3P35244 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPA3P35244 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPA3P35244 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms