Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCKBRP32239 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.97■□□□□ 0.47
CCKBRP32239 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCKBRP32239 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.97■□□□□ 0.47
CCKBRP32239 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCKBRP32239 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCKBRP32239 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.97■□□□□ 0.47
CCKBRP32239 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCKBRP32239 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCKBRP32239 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.96■□□□□ 0.47
CCKBRP32239 AL162741.1-201ENST00000565563 1558 ntBASIC17.96■□□□□ 0.47
CCKBRP32239 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCKBRP32239 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.96■□□□□ 0.47
CCKBRP32239 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCKBRP32239 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.96■□□□□ 0.47
CCKBRP32239 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CCKBRP32239 MIR3180-1-201ENST00000580374 94 ntBASIC17.96■□□□□ 0.47
CCKBRP32239 MIR3180-3-201ENST00000584616 94 ntBASIC17.96■□□□□ 0.47
CCKBRP32239 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.96■□□□□ 0.47
CCKBRP32239 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.96■□□□□ 0.47
CCKBRP32239 AC079602.3-201ENST00000623931 403 ntBASIC17.96■□□□□ 0.47
CCKBRP32239 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCKBRP32239 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CCKBRP32239 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CCKBRP32239 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCKBRP32239 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCKBRP32239 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCKBRP32239 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.95■□□□□ 0.46
CCKBRP32239 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.95■□□□□ 0.46
CCKBRP32239 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCKBRP32239 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.95■□□□□ 0.46
CCKBRP32239 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.95■□□□□ 0.46
CCKBRP32239 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.95■□□□□ 0.46
CCKBRP32239 AL136038.4-201ENST00000603606 1261 ntBASIC17.95■□□□□ 0.46
CCKBRP32239 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.95■□□□□ 0.46
CCKBRP32239 AL157888.1-201ENST00000631930 593 ntBASIC17.95■□□□□ 0.46
CCKBRP32239 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.95■□□□□ 0.46
CCKBRP32239 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.95■□□□□ 0.46
CCKBRP32239 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 KRT8P7-201ENST00000533003 1432 ntBASIC17.95■□□□□ 0.46
CCKBRP32239 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCKBRP32239 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.95■□□□□ 0.46
CCKBRP32239 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCKBRP32239 AC007952.6-201ENST00000573168 2673 ntBASIC17.95■□□□□ 0.46
CCKBRP32239 AC003957.1-201ENST00000625108 2673 ntBASIC17.95■□□□□ 0.46
CCKBRP32239 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CCKBRP32239 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.94■□□□□ 0.46
CCKBRP32239 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.94■□□□□ 0.46
CCKBRP32239 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.94■□□□□ 0.46
CCKBRP32239 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.94■□□□□ 0.46
CCKBRP32239 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCKBRP32239 MIR662-201ENST00000384847 95 ntBASIC17.94■□□□□ 0.46
CCKBRP32239 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.94■□□□□ 0.46
CCKBRP32239 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.94■□□□□ 0.46
CCKBRP32239 AP002383.4-201ENST00000442518 975 ntBASIC17.94■□□□□ 0.46
CCKBRP32239 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.94■□□□□ 0.46
CCKBRP32239 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCKBRP32239 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCKBRP32239 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCKBRP32239 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCKBRP32239 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.94■□□□□ 0.46
CCKBRP32239 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.94■□□□□ 0.46
CCKBRP32239 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCKBRP32239 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCKBRP32239 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCKBRP32239 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms