Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CTGFP29279 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.09■□□□□ 0.97
CTGFP29279 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTGFP29279 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.09■□□□□ 0.97
CTGFP29279 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CTGFP29279 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTGFP29279 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.09■□□□□ 0.97
CTGFP29279 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
CTGFP29279 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTGFP29279 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTGFP29279 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
CTGFP29279 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.09■□□□□ 0.97
CTGFP29279 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.09■□□□□ 0.97
CTGFP29279 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.09■□□□□ 0.97
CTGFP29279 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.09■□□□□ 0.97
CTGFP29279 AL355877.3-201ENST00000622820 899 ntBASIC21.09■□□□□ 0.97
CTGFP29279 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTGFP29279 ZNF259P1-201ENST00000407656 1365 ntBASIC21.09■□□□□ 0.97
CTGFP29279 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTGFP29279 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTGFP29279 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CTGFP29279 KRT89P-201ENST00000620027 1478 ntBASIC21.08■□□□□ 0.97
CTGFP29279 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTGFP29279 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTGFP29279 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTGFP29279 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTGFP29279 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.08■□□□□ 0.97
CTGFP29279 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.08■□□□□ 0.97
CTGFP29279 RCN1P2-201ENST00000398357 915 ntBASIC21.08■□□□□ 0.97
CTGFP29279 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTGFP29279 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.08■□□□□ 0.97
CTGFP29279 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.08■□□□□ 0.97
CTGFP29279 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.08■□□□□ 0.97
CTGFP29279 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.08■□□□□ 0.97
CTGFP29279 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.08■□□□□ 0.97
CTGFP29279 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.08■□□□□ 0.97
CTGFP29279 AL355385.1-201ENST00000606123 409 ntBASIC21.08■□□□□ 0.97
CTGFP29279 Z82202.1-201ENST00000623446 1880 ntBASIC21.08■□□□□ 0.97
CTGFP29279 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTGFP29279 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CTGFP29279 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTGFP29279 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CTGFP29279 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTGFP29279 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CTGFP29279 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.07■□□□□ 0.96
CTGFP29279 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
CTGFP29279 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.07■□□□□ 0.96
CTGFP29279 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.07■□□□□ 0.96
CTGFP29279 AL139424.1-201ENST00000607572 797 ntBASIC21.07■□□□□ 0.96
CTGFP29279 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.07■□□□□ 0.96
CTGFP29279 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTGFP29279 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CTGFP29279 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.06■□□□□ 0.96
CTGFP29279 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.06■□□□□ 0.96
CTGFP29279 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.06■□□□□ 0.96
CTGFP29279 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.06■□□□□ 0.96
CTGFP29279 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.06■□□□□ 0.96
CTGFP29279 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.06■□□□□ 0.96
CTGFP29279 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.06■□□□□ 0.96
CTGFP29279 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.06■□□□□ 0.96
CTGFP29279 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.06■□□□□ 0.96
CTGFP29279 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.06■□□□□ 0.96
CTGFP29279 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.06■□□□□ 0.96
CTGFP29279 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CTGFP29279 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.06■□□□□ 0.96
CTGFP29279 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTGFP29279 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
CTGFP29279 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.05■□□□□ 0.96
CTGFP29279 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 IGHV3-22-201ENST00000520721 359 ntBASIC21.05■□□□□ 0.96
CTGFP29279 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.05■□□□□ 0.96
CTGFP29279 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTGFP29279 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms