Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
COL8A2P25067 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL8A2P25067 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.81■□□□□ 0.12
COL8A2P25067 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
COL8A2P25067 RCC2P3-201ENST00000418112 1537 ntBASIC15.81■□□□□ 0.12
COL8A2P25067 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.81■□□□□ 0.12
COL8A2P25067 AC112907.2-201ENST00000448639 330 ntBASIC15.81■□□□□ 0.12
COL8A2P25067 AL671277.2-201ENST00000458060 996 ntBASIC15.81■□□□□ 0.12
COL8A2P25067 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL8A2P25067 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL8A2P25067 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.81■□□□□ 0.12
COL8A2P25067 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.81■□□□□ 0.12
COL8A2P25067 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
COL8A2P25067 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.81■□□□□ 0.12
COL8A2P25067 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
COL8A2P25067 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
COL8A2P25067 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.81■□□□□ 0.12
COL8A2P25067 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL8A2P25067 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL8A2P25067 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
COL8A2P25067 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COL8A2P25067 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 FAM86EP-206ENST00000510506 987 ntBASIC15.8■□□□□ 0.12
COL8A2P25067 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.8■□□□□ 0.12
COL8A2P25067 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.8■□□□□ 0.12
COL8A2P25067 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
COL8A2P25067 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.8■□□□□ 0.12
COL8A2P25067 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.8■□□□□ 0.12
COL8A2P25067 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 AC008556.1-201ENST00000610908 2040 ntBASIC15.8■□□□□ 0.12
COL8A2P25067 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.8■□□□□ 0.12
COL8A2P25067 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL8A2P25067 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
COL8A2P25067 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
COL8A2P25067 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.79■□□□□ 0.12
COL8A2P25067 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
COL8A2P25067 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
COL8A2P25067 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
COL8A2P25067 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.79■□□□□ 0.12
COL8A2P25067 STARP1-201ENST00000397973 869 ntBASIC15.79■□□□□ 0.12
COL8A2P25067 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.79■□□□□ 0.12
COL8A2P25067 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.79■□□□□ 0.12
COL8A2P25067 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.79■□□□□ 0.12
COL8A2P25067 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL8A2P25067 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
COL8A2P25067 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COL8A2P25067 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COL8A2P25067 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.78■□□□□ 0.12
COL8A2P25067 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COL8A2P25067 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COL8A2P25067 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
COL8A2P25067 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 PCED1CP-201ENST00000419887 785 ntBASIC15.78■□□□□ 0.12
COL8A2P25067 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.78■□□□□ 0.12
COL8A2P25067 AC091076.1-201ENST00000610741 619 ntBASIC15.78■□□□□ 0.12
COL8A2P25067 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms