Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 FSCN1P1-201ENST00000568912 1481 ntBASIC17.51■□□□□ 0.39
CHMP24386 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHMP24386 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP24386 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHMP24386 BX088651.1-201ENST00000540551 451 ntBASIC17.51■□□□□ 0.39
CHMP24386 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.51■□□□□ 0.39
CHMP24386 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP24386 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.51■□□□□ 0.39
CHMP24386 REXO1L12P-201ENST00000622156 912 ntBASIC17.51■□□□□ 0.39
CHMP24386 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP24386 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHMP24386 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP24386 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP24386 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHMP24386 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP24386 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHMP24386 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHMP24386 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP24386 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
CHMP24386 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHMP24386 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.5■□□□□ 0.39
CHMP24386 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.5■□□□□ 0.39
CHMP24386 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.5■□□□□ 0.39
CHMP24386 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.5■□□□□ 0.39
CHMP24386 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CHMP24386 AL355075.4-201ENST00000554988 638 ntBASIC17.5■□□□□ 0.39
CHMP24386 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP24386 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.5■□□□□ 0.39
CHMP24386 REXO1L10P-201ENST00000615707 1290 ntBASIC17.5■□□□□ 0.39
CHMP24386 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHMP24386 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP24386 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHMP24386 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP24386 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP24386 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP24386 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CHMP24386 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP24386 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHMP24386 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP24386 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHMP24386 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.49■□□□□ 0.39
CHMP24386 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.49■□□□□ 0.39
CHMP24386 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP24386 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.49■□□□□ 0.39
CHMP24386 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHMP24386 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP24386 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CHMP24386 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 NOC2LP1-202ENST00000452600 2235 ntBASIC17.48■□□□□ 0.39
CHMP24386 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP24386 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMP24386 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHMP24386 UNC93B2-201ENST00000285383 730 ntBASIC17.48■□□□□ 0.39
CHMP24386 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.48■□□□□ 0.39
CHMP24386 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.48■□□□□ 0.39
CHMP24386 AL160286.2-201ENST00000567150 934 ntBASIC17.48■□□□□ 0.39
CHMP24386 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
CHMP24386 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHMP24386 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP24386 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMP24386 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP24386 NOC2LP2-201ENST00000407594 1944 ntBASIC17.48■□□□□ 0.39
CHMP24386 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms