Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XPAP23025 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XPAP23025 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
XPAP23025 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.89■□□□□ 0.61
XPAP23025 AC092647.4-201ENST00000457211 535 ntBASIC18.89■□□□□ 0.61
XPAP23025 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.89■□□□□ 0.61
XPAP23025 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.89■□□□□ 0.61
XPAP23025 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
XPAP23025 MIR3180-5-201ENST00000583743 153 ntBASIC18.89■□□□□ 0.61
XPAP23025 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.89■□□□□ 0.61
XPAP23025 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.89■□□□□ 0.61
XPAP23025 AC006011.2-201ENST00000621313 1158 ntBASIC18.89■□□□□ 0.61
XPAP23025 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XPAP23025 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
XPAP23025 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
XPAP23025 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.89■□□□□ 0.61
XPAP23025 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
XPAP23025 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XPAP23025 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.89■□□□□ 0.61
XPAP23025 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
XPAP23025 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.89■□□□□ 0.61
XPAP23025 AC036111.1-201ENST00000533973 1582 ntBASIC18.89■□□□□ 0.61
XPAP23025 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.88■□□□□ 0.61
XPAP23025 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
XPAP23025 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
XPAP23025 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
XPAP23025 AC117947.1-201ENST00000427448 529 ntBASIC18.88■□□□□ 0.61
XPAP23025 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
XPAP23025 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 YBX1P2-201ENST00000489612 999 ntBASIC18.88■□□□□ 0.61
XPAP23025 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.88■□□□□ 0.61
XPAP23025 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.88■□□□□ 0.61
XPAP23025 AL023973.1-201ENST00000624619 620 ntBASIC18.88■□□□□ 0.61
XPAP23025 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
XPAP23025 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
XPAP23025 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
XPAP23025 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
XPAP23025 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
XPAP23025 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.88■□□□□ 0.61
XPAP23025 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XPAP23025 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
XPAP23025 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.87■□□□□ 0.61
XPAP23025 RNF152P1-201ENST00000397754 604 ntBASIC18.87■□□□□ 0.61
XPAP23025 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
XPAP23025 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.87■□□□□ 0.61
XPAP23025 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.87■□□□□ 0.61
XPAP23025 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.87■□□□□ 0.61
XPAP23025 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
XPAP23025 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.87■□□□□ 0.61
XPAP23025 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
XPAP23025 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.86■□□□□ 0.61
XPAP23025 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
XPAP23025 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.86■□□□□ 0.61
XPAP23025 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.86■□□□□ 0.61
XPAP23025 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
XPAP23025 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.86■□□□□ 0.61
XPAP23025 WWOX-216ENST00000569818 525 ntBASIC18.86■□□□□ 0.61
XPAP23025 NEK4P2-201ENST00000580004 1012 ntBASIC18.86■□□□□ 0.61
XPAP23025 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.86■□□□□ 0.61
XPAP23025 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
XPAP23025 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.86■□□□□ 0.61
XPAP23025 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
XPAP23025 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.86■□□□□ 0.61
XPAP23025 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
XPAP23025 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XPAP23025 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
XPAP23025 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms