Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.63■■□□□ 1.05
ERCC3P19447 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
ERCC3P19447 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.63■■□□□ 1.05
ERCC3P19447 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC3P19447 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ERCC3P19447 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.63■■□□□ 1.05
ERCC3P19447 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.62■■□□□ 1.05
ERCC3P19447 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC3P19447 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.62■■□□□ 1.05
ERCC3P19447 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ERCC3P19447 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC3P19447 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.62■■□□□ 1.05
ERCC3P19447 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC3P19447 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC3P19447 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.62■■□□□ 1.05
ERCC3P19447 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC3P19447 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
ERCC3P19447 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.62■■□□□ 1.05
ERCC3P19447 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.62■■□□□ 1.05
ERCC3P19447 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC3P19447 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.62■■□□□ 1.05
ERCC3P19447 AC011498.5-201ENST00000592027 486 ntBASIC21.62■■□□□ 1.05
ERCC3P19447 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.62■■□□□ 1.05
ERCC3P19447 AL691432.3-201ENST00000621860 400 ntBASIC21.62■■□□□ 1.05
ERCC3P19447 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.62■■□□□ 1.05
ERCC3P19447 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.62■■□□□ 1.05
ERCC3P19447 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC3P19447 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC3P19447 KRT8P3-201ENST00000519669 1449 ntBASIC21.62■■□□□ 1.05
ERCC3P19447 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.62■■□□□ 1.05
ERCC3P19447 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
ERCC3P19447 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC3P19447 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.61■■□□□ 1.05
ERCC3P19447 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.61■■□□□ 1.05
ERCC3P19447 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC3P19447 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.61■■□□□ 1.05
ERCC3P19447 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC3P19447 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC3P19447 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.61■■□□□ 1.05
ERCC3P19447 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.61■■□□□ 1.05
ERCC3P19447 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC3P19447 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ERCC3P19447 SEC1P-202ENST00000473944 940 ntBASIC21.61■■□□□ 1.05
ERCC3P19447 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.61■■□□□ 1.05
ERCC3P19447 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.61■■□□□ 1.05
ERCC3P19447 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
ERCC3P19447 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.61■■□□□ 1.05
ERCC3P19447 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC3P19447 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC3P19447 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC3P19447 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC3P19447 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC3P19447 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.6■■□□□ 1.05
ERCC3P19447 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC3P19447 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC3P19447 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC3P19447 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.6■■□□□ 1.05
ERCC3P19447 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.6■■□□□ 1.05
ERCC3P19447 TSSC2-201ENST00000450217 709 ntBASIC21.6■■□□□ 1.05
ERCC3P19447 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.6■■□□□ 1.05
ERCC3P19447 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.6■■□□□ 1.05
ERCC3P19447 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.6■■□□□ 1.05
ERCC3P19447 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.6■■□□□ 1.05
ERCC3P19447 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC3P19447 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.6■■□□□ 1.05
ERCC3P19447 AC092329.2-201ENST00000598402 547 ntBASIC21.6■■□□□ 1.05
ERCC3P19447 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC3P19447 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC3P19447 AC079602.3-201ENST00000623931 403 ntBASIC21.6■■□□□ 1.05
ERCC3P19447 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.6■■□□□ 1.05
ERCC3P19447 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC3P19447 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.6■■□□□ 1.05
ERCC3P19447 AC016734.2-201ENST00000624325 1377 ntBASIC21.6■■□□□ 1.05
ERCC3P19447 AC093484.2-201ENST00000580996 2166 ntBASIC21.6■■□□□ 1.05
ERCC3P19447 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ERCC3P19447 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ERCC3P19447 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ERCC3P19447 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
ERCC3P19447 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.59■■□□□ 1.05
ERCC3P19447 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC3P19447 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ERCC3P19447 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms