Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.34■□□□□ 0.85
SYN1P17600 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SYN1P17600 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.34■□□□□ 0.85
SYN1P17600 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.34■□□□□ 0.85
SYN1P17600 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.34■□□□□ 0.85
SYN1P17600 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 AC092910.1-201ENST00000482027 1129 ntBASIC20.34■□□□□ 0.85
SYN1P17600 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.34■□□□□ 0.85
SYN1P17600 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 AC007375.3-201ENST00000600936 2314 ntBASIC20.34■□□□□ 0.85
SYN1P17600 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.34■□□□□ 0.85
SYN1P17600 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYN1P17600 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.34■□□□□ 0.85
SYN1P17600 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYN1P17600 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYN1P17600 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYN1P17600 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SYN1P17600 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYN1P17600 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SYN1P17600 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYN1P17600 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.33■□□□□ 0.85
SYN1P17600 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.33■□□□□ 0.85
SYN1P17600 AL591424.1-201ENST00000442569 1213 ntBASIC20.33■□□□□ 0.85
SYN1P17600 DNAJB3-201ENST00000446806 729 ntBASIC20.33■□□□□ 0.85
SYN1P17600 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.33■□□□□ 0.85
SYN1P17600 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SYN1P17600 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYN1P17600 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SYN1P17600 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.33■□□□□ 0.84
SYN1P17600 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYN1P17600 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.33■□□□□ 0.84
SYN1P17600 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SYN1P17600 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYN1P17600 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYN1P17600 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SYN1P17600 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYN1P17600 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYN1P17600 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.32■□□□□ 0.84
SYN1P17600 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYN1P17600 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.32■□□□□ 0.84
SYN1P17600 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYN1P17600 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYN1P17600 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SYN1P17600 RCN1P2-201ENST00000398357 915 ntBASIC20.32■□□□□ 0.84
SYN1P17600 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.32■□□□□ 0.84
SYN1P17600 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.32■□□□□ 0.84
SYN1P17600 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYN1P17600 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.32■□□□□ 0.84
SYN1P17600 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYN1P17600 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.32■□□□□ 0.84
SYN1P17600 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYN1P17600 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.32■□□□□ 0.84
SYN1P17600 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 KRT18P28-201ENST00000453838 1332 ntBASIC20.31■□□□□ 0.84
SYN1P17600 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.31■□□□□ 0.84
SYN1P17600 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SYN1P17600 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.31■□□□□ 0.84
SYN1P17600 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SYN1P17600 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.31■□□□□ 0.84
SYN1P17600 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.31■□□□□ 0.84
SYN1P17600 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.31■□□□□ 0.84
SYN1P17600 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYN1P17600 AL109659.2-201ENST00000606809 1674 ntBASIC20.31■□□□□ 0.84
SYN1P17600 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.31■□□□□ 0.84
SYN1P17600 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.3■□□□□ 0.84
SYN1P17600 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.3■□□□□ 0.84
SYN1P17600 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SYN1P17600 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.3■□□□□ 0.84
SYN1P17600 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.3■□□□□ 0.84
SYN1P17600 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 RPS2P1-201ENST00000434010 821 ntBASIC20.3■□□□□ 0.84
SYN1P17600 METTL21AP1-201ENST00000438852 635 ntBASIC20.3■□□□□ 0.84
SYN1P17600 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SYN1P17600 AC040169.1-201ENST00000565382 521 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms