Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.54■□□□□ 0.72
TCF4P15884 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TCF4P15884 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TCF4P15884 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 CRYGFP-201ENST00000418459 633 ntBASIC19.54■□□□□ 0.72
TCF4P15884 RBM17P1-201ENST00000453646 1190 ntBASIC19.54■□□□□ 0.72
TCF4P15884 TSPY15P-201ENST00000457163 923 ntBASIC19.54■□□□□ 0.72
TCF4P15884 SNORA78-201ENST00000459373 127 ntBASIC19.54■□□□□ 0.72
TCF4P15884 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.54■□□□□ 0.72
TCF4P15884 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TCF4P15884 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TCF4P15884 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.54■□□□□ 0.72
TCF4P15884 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCF4P15884 AC079598.2-202ENST00000546624 1451 ntBASIC19.54■□□□□ 0.72
TCF4P15884 BICD1-207ENST00000551848 1962 ntBASIC19.53■□□□□ 0.72
TCF4P15884 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TCF4P15884 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TCF4P15884 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.53■□□□□ 0.72
TCF4P15884 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TCF4P15884 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.53■□□□□ 0.72
TCF4P15884 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.53■□□□□ 0.72
TCF4P15884 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCF4P15884 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.53■□□□□ 0.72
TCF4P15884 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.53■□□□□ 0.72
TCF4P15884 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCF4P15884 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.53■□□□□ 0.72
TCF4P15884 AL390955.1-201ENST00000428694 934 ntBASIC19.53■□□□□ 0.72
TCF4P15884 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCF4P15884 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCF4P15884 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.53■□□□□ 0.72
TCF4P15884 MIR4674-201ENST00000582457 87 ntBASIC19.53■□□□□ 0.72
TCF4P15884 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TCF4P15884 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCF4P15884 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCF4P15884 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TCF4P15884 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.53■□□□□ 0.72
TCF4P15884 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TCF4P15884 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCF4P15884 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCF4P15884 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
TCF4P15884 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.52■□□□□ 0.72
TCF4P15884 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TCF4P15884 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TCF4P15884 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TCF4P15884 AL023284.2-201ENST00000405850 579 ntBASIC19.52■□□□□ 0.72
TCF4P15884 AP000525.1-201ENST00000608286 694 ntBASIC19.52■□□□□ 0.72
TCF4P15884 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.52■□□□□ 0.72
TCF4P15884 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.52■□□□□ 0.72
TCF4P15884 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TCF4P15884 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TCF4P15884 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCF4P15884 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
TCF4P15884 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TCF4P15884 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TCF4P15884 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.51■□□□□ 0.71
TCF4P15884 AC073592.3-201ENST00000625118 1834 ntBASIC19.51■□□□□ 0.71
TCF4P15884 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TCF4P15884 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TCF4P15884 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.51■□□□□ 0.71
TCF4P15884 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCF4P15884 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.51■□□□□ 0.71
TCF4P15884 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.51■□□□□ 0.71
TCF4P15884 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.51■□□□□ 0.71
TCF4P15884 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.51■□□□□ 0.71
TCF4P15884 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.51■□□□□ 0.71
TCF4P15884 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.51■□□□□ 0.71
TCF4P15884 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.51■□□□□ 0.71
TCF4P15884 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms