Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
CTSDP07339 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.55■□□□□ 0.08
CTSDP07339 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CTSDP07339 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.55■□□□□ 0.08
CTSDP07339 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CTSDP07339 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.55■□□□□ 0.08
CTSDP07339 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.55■□□□□ 0.08
CTSDP07339 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CTSDP07339 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.55■□□□□ 0.08
CTSDP07339 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.55■□□□□ 0.08
CTSDP07339 AC073111.5-205ENST00000641717 521 ntBASIC15.55■□□□□ 0.08
CTSDP07339 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CTSDP07339 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTSDP07339 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.55■□□□□ 0.08
CTSDP07339 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.55■□□□□ 0.08
CTSDP07339 AC138028.4-201ENST00000564984 1845 ntBASIC15.54■□□□□ 0.08
CTSDP07339 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.54■□□□□ 0.08
CTSDP07339 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.54■□□□□ 0.08
CTSDP07339 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 AC112777.1-201ENST00000540175 1423 ntBASIC15.54■□□□□ 0.08
CTSDP07339 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.54■□□□□ 0.08
CTSDP07339 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 AF201337.1-201ENST00000520239 748 ntBASIC15.54■□□□□ 0.08
CTSDP07339 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 AL160286.2-201ENST00000567150 934 ntBASIC15.54■□□□□ 0.08
CTSDP07339 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 AL121829.2-201ENST00000620908 328 ntBASIC15.54■□□□□ 0.08
CTSDP07339 AC068587.9-201ENST00000641814 219 ntBASIC15.54■□□□□ 0.08
CTSDP07339 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.54■□□□□ 0.08
CTSDP07339 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTSDP07339 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.53■□□□□ 0.08
CTSDP07339 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.53■□□□□ 0.08
CTSDP07339 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CTSDP07339 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 AC093677.2-201ENST00000600169 1863 ntBASIC15.53■□□□□ 0.08
CTSDP07339 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CTSDP07339 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.53■□□□□ 0.08
CTSDP07339 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms