Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ERBB2P04626 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ERBB2P04626 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.65■□□□□ 0.74
ERBB2P04626 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.65■□□□□ 0.74
ERBB2P04626 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.65■□□□□ 0.74
ERBB2P04626 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
ERBB2P04626 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
ERBB2P04626 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.65■□□□□ 0.74
ERBB2P04626 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.65■□□□□ 0.74
ERBB2P04626 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ERBB2P04626 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.65■□□□□ 0.74
ERBB2P04626 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.65■□□□□ 0.74
ERBB2P04626 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERBB2P04626 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.64■□□□□ 0.74
ERBB2P04626 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.64■□□□□ 0.73
ERBB2P04626 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ERBB2P04626 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.64■□□□□ 0.73
ERBB2P04626 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.64■□□□□ 0.73
ERBB2P04626 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.64■□□□□ 0.73
ERBB2P04626 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.64■□□□□ 0.73
ERBB2P04626 AC145285.6-201ENST00000604632 637 ntBASIC19.64■□□□□ 0.73
ERBB2P04626 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.64■□□□□ 0.73
ERBB2P04626 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.64■□□□□ 0.73
ERBB2P04626 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.64■□□□□ 0.73
ERBB2P04626 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.64■□□□□ 0.73
ERBB2P04626 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ERBB2P04626 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
ERBB2P04626 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
ERBB2P04626 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 AC009113.1-201ENST00000570267 2443 ntBASIC19.64■□□□□ 0.73
ERBB2P04626 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERBB2P04626 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.64■□□□□ 0.73
ERBB2P04626 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
ERBB2P04626 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.63■□□□□ 0.73
ERBB2P04626 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.63■□□□□ 0.73
ERBB2P04626 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
ERBB2P04626 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ERBB2P04626 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.63■□□□□ 0.73
ERBB2P04626 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.63■□□□□ 0.73
ERBB2P04626 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.63■□□□□ 0.73
ERBB2P04626 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.63■□□□□ 0.73
ERBB2P04626 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.63■□□□□ 0.73
ERBB2P04626 AC133561.5-201ENST00000635547 218 ntBASIC19.63■□□□□ 0.73
ERBB2P04626 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.63■□□□□ 0.73
ERBB2P04626 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ERBB2P04626 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERBB2P04626 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERBB2P04626 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERBB2P04626 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.62■□□□□ 0.73
ERBB2P04626 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.62■□□□□ 0.73
ERBB2P04626 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERBB2P04626 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERBB2P04626 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERBB2P04626 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ERBB2P04626 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms