Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 SLC25A3P1-201ENST00000443844 931 ntBASIC20.11■□□□□ 0.81
HLA-DRAP01903 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HLA-DRAP01903 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DRAP01903 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DRAP01903 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HLA-DRAP01903 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HLA-DRAP01903 WIZP1-201ENST00000531444 2299 ntBASIC20.09■□□□□ 0.81
HLA-DRAP01903 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.09■□□□□ 0.81
HLA-DRAP01903 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DRAP01903 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DRAP01903 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DRAP01903 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HLA-DRAP01903 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HLA-DRAP01903 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DRAP01903 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.09■□□□□ 0.81
HLA-DRAP01903 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HLA-DRAP01903 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DRAP01903 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DRAP01903 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HLA-DRAP01903 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DRAP01903 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.08■□□□□ 0.81
HLA-DRAP01903 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
HLA-DRAP01903 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRAP01903 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRAP01903 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRAP01903 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.08■□□□□ 0.81
HLA-DRAP01903 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRAP01903 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRAP01903 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRAP01903 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRAP01903 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRAP01903 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.08■□□□□ 0.81
HLA-DRAP01903 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DRAP01903 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
HLA-DRAP01903 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.08■□□□□ 0.81
HLA-DRAP01903 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.08■□□□□ 0.81
HLA-DRAP01903 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.08■□□□□ 0.81
HLA-DRAP01903 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DRAP01903 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.08■□□□□ 0.8
HLA-DRAP01903 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DRAP01903 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DRAP01903 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DRAP01903 AC034236.2-201ENST00000606662 1610 ntBASIC20.08■□□□□ 0.8
HLA-DRAP01903 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.08■□□□□ 0.8
HLA-DRAP01903 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DRAP01903 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRAP01903 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRAP01903 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRAP01903 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DRAP01903 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRAP01903 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRAP01903 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DRAP01903 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRAP01903 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRAP01903 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRAP01903 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DRAP01903 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms