Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDGFBP01127 RCN1P2-201ENST00000398357 915 ntBASIC18.8■□□□□ 0.6
PDGFBP01127 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.8■□□□□ 0.6
PDGFBP01127 KRT18P3-201ENST00000451602 1288 ntBASIC18.8■□□□□ 0.6
PDGFBP01127 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 MIR3197-201ENST00000582241 73 ntBASIC18.8■□□□□ 0.6
PDGFBP01127 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.8■□□□□ 0.6
PDGFBP01127 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.8■□□□□ 0.6
PDGFBP01127 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PDGFBP01127 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 DNAJB3-202ENST00000449667 1266 ntBASIC18.79■□□□□ 0.6
PDGFBP01127 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.79■□□□□ 0.6
PDGFBP01127 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.79■□□□□ 0.6
PDGFBP01127 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
PDGFBP01127 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PDGFBP01127 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFBP01127 AC079834.2-201ENST00000609776 1949 ntBASIC18.78■□□□□ 0.6
PDGFBP01127 AC020907.5-201ENST00000624372 1936 ntBASIC18.78■□□□□ 0.6
PDGFBP01127 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.78■□□□□ 0.6
PDGFBP01127 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.78■□□□□ 0.6
PDGFBP01127 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDGFBP01127 SART3-203ENST00000546611 1184 ntBASIC18.78■□□□□ 0.6
PDGFBP01127 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
PDGFBP01127 AP001269.4-201ENST00000609611 512 ntBASIC18.78■□□□□ 0.6
PDGFBP01127 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.78■□□□□ 0.6
PDGFBP01127 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.78■□□□□ 0.6
PDGFBP01127 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDGFBP01127 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDGFBP01127 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.78■□□□□ 0.6
PDGFBP01127 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFBP01127 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.78■□□□□ 0.6
PDGFBP01127 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PDGFBP01127 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFBP01127 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.77■□□□□ 0.6
PDGFBP01127 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFBP01127 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.77■□□□□ 0.6
PDGFBP01127 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFBP01127 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.77■□□□□ 0.6
PDGFBP01127 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFBP01127 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.77■□□□□ 0.6
PDGFBP01127 RPS2P28-201ENST00000314255 741 ntBASIC18.77■□□□□ 0.6
PDGFBP01127 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.77■□□□□ 0.6
PDGFBP01127 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFBP01127 AC092910.1-201ENST00000482027 1129 ntBASIC18.77■□□□□ 0.6
PDGFBP01127 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFBP01127 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDGFBP01127 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.77■□□□□ 0.6
PDGFBP01127 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFBP01127 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.77■□□□□ 0.59
PDGFBP01127 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PDGFBP01127 AL512353.2-201ENST00000448759 1962 ntBASIC18.77■□□□□ 0.59
PDGFBP01127 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDGFBP01127 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDGFBP01127 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFBP01127 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFBP01127 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFBP01127 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
PDGFBP01127 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFBP01127 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PDGFBP01127 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDGFBP01127 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.76■□□□□ 0.59
PDGFBP01127 RPS2P1-201ENST00000434010 821 ntBASIC18.76■□□□□ 0.59
PDGFBP01127 AL591424.1-201ENST00000442569 1213 ntBASIC18.76■□□□□ 0.59
PDGFBP01127 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.76■□□□□ 0.59
PDGFBP01127 AC012640.2-201ENST00000561606 901 ntBASIC18.76■□□□□ 0.59
PDGFBP01127 AC021087.4-201ENST00000563761 564 ntBASIC18.76■□□□□ 0.59
PDGFBP01127 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFBP01127 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.76■□□□□ 0.59
PDGFBP01127 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDGFBP01127 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFBP01127 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFBP01127 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFBP01127 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFBP01127 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFBP01127 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms