Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 GUSBP6-202ENST00000438529 1198 ntBASIC17.67■□□□□ 0.42
CLPTM1O96005 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.67■□□□□ 0.42
CLPTM1O96005 TSPY6P-201ENST00000448518 926 ntBASIC17.67■□□□□ 0.42
CLPTM1O96005 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.67■□□□□ 0.42
CLPTM1O96005 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.67■□□□□ 0.42
CLPTM1O96005 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.67■□□□□ 0.42
CLPTM1O96005 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLPTM1O96005 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CLPTM1O96005 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLPTM1O96005 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CLPTM1O96005 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLPTM1O96005 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLPTM1O96005 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.66■□□□□ 0.42
CLPTM1O96005 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.66■□□□□ 0.42
CLPTM1O96005 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.66■□□□□ 0.42
CLPTM1O96005 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLPTM1O96005 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.66■□□□□ 0.42
CLPTM1O96005 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CLPTM1O96005 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CLPTM1O96005 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.66■□□□□ 0.42
CLPTM1O96005 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLPTM1O96005 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.66■□□□□ 0.42
CLPTM1O96005 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.66■□□□□ 0.42
CLPTM1O96005 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLPTM1O96005 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLPTM1O96005 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 AL645608.8-201ENST00000606034 2086 ntBASIC17.65■□□□□ 0.42
CLPTM1O96005 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLPTM1O96005 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.65■□□□□ 0.42
CLPTM1O96005 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLPTM1O96005 SLC29A4P1-201ENST00000398760 971 ntBASIC17.65■□□□□ 0.42
CLPTM1O96005 AL355802.2-201ENST00000402069 882 ntBASIC17.65■□□□□ 0.42
CLPTM1O96005 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.65■□□□□ 0.42
CLPTM1O96005 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLPTM1O96005 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.65■□□□□ 0.42
CLPTM1O96005 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.65■□□□□ 0.42
CLPTM1O96005 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLPTM1O96005 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLPTM1O96005 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.65■□□□□ 0.42
CLPTM1O96005 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.65■□□□□ 0.42
CLPTM1O96005 AD000864.1-201ENST00000624076 2295 ntBASIC17.65■□□□□ 0.42
CLPTM1O96005 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CLPTM1O96005 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLPTM1O96005 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
CLPTM1O96005 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLPTM1O96005 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLPTM1O96005 KRT8P17-201ENST00000453110 1448 ntBASIC17.64■□□□□ 0.42
CLPTM1O96005 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
CLPTM1O96005 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLPTM1O96005 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLPTM1O96005 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.64■□□□□ 0.41
CLPTM1O96005 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLPTM1O96005 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLPTM1O96005 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLPTM1O96005 AC046158.3-201ENST00000624947 2558 ntBASIC17.64■□□□□ 0.41
CLPTM1O96005 AC008894.3-201ENST00000624324 3103 ntBASIC17.64■□□□□ 0.41
CLPTM1O96005 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLPTM1O96005 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms