Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.67■□□□□ 0.1
ABCA1O95477 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCA1O95477 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 CHCHD2P8-201ENST00000429873 447 ntBASIC15.66■□□□□ 0.1
ABCA1O95477 BX276092.5-203ENST00000456199 560 ntBASIC15.66■□□□□ 0.1
ABCA1O95477 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.66■□□□□ 0.1
ABCA1O95477 AC092119.3-201ENST00000612618 583 ntBASIC15.66■□□□□ 0.1
ABCA1O95477 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.66■□□□□ 0.1
ABCA1O95477 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCA1O95477 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ABCA1O95477 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ABCA1O95477 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCA1O95477 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.66■□□□□ 0.1
ABCA1O95477 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCA1O95477 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
ABCA1O95477 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCA1O95477 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCA1O95477 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ABCA1O95477 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.65■□□□□ 0.1
ABCA1O95477 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.65■□□□□ 0.1
ABCA1O95477 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ABCA1O95477 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 AP000593.1-201ENST00000393668 712 ntBASIC15.65■□□□□ 0.1
ABCA1O95477 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.65■□□□□ 0.1
ABCA1O95477 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.65■□□□□ 0.1
ABCA1O95477 SLC25A6P4-201ENST00000586535 553 ntBASIC15.65■□□□□ 0.1
ABCA1O95477 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCA1O95477 AC006538.3-201ENST00000612495 578 ntBASIC15.65■□□□□ 0.1
ABCA1O95477 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCA1O95477 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ABCA1O95477 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ABCA1O95477 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ABCA1O95477 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.64■□□□□ 0.09
ABCA1O95477 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
ABCA1O95477 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ABCA1O95477 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCA1O95477 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.64■□□□□ 0.09
ABCA1O95477 AL160237.2-201ENST00000556165 472 ntBASIC15.64■□□□□ 0.09
ABCA1O95477 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.64■□□□□ 0.09
ABCA1O95477 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.64■□□□□ 0.09
ABCA1O95477 AC104692.2-201ENST00000603054 253 ntBASIC15.64■□□□□ 0.09
ABCA1O95477 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCA1O95477 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.64■□□□□ 0.09
ABCA1O95477 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCA1O95477 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCA1O95477 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCA1O95477 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ABCA1O95477 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms