Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.83■□□□□ 0.6
VAPBO95292 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
VAPBO95292 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.83■□□□□ 0.6
VAPBO95292 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.83■□□□□ 0.6
VAPBO95292 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
VAPBO95292 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.83■□□□□ 0.6
VAPBO95292 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VAPBO95292 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VAPBO95292 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAPBO95292 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VAPBO95292 AC126763.1-201ENST00000552015 2118 ntBASIC18.82■□□□□ 0.6
VAPBO95292 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAPBO95292 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAPBO95292 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.82■□□□□ 0.6
VAPBO95292 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VAPBO95292 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
VAPBO95292 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAPBO95292 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAPBO95292 NUDT16P1-203ENST00000513809 620 ntBASIC18.82■□□□□ 0.6
VAPBO95292 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.82■□□□□ 0.6
VAPBO95292 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.82■□□□□ 0.6
VAPBO95292 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
VAPBO95292 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.82■□□□□ 0.6
VAPBO95292 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VAPBO95292 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAPBO95292 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAPBO95292 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.82■□□□□ 0.6
VAPBO95292 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.82■□□□□ 0.6
VAPBO95292 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAPBO95292 AL499627.1-201ENST00000569373 2188 ntBASIC18.82■□□□□ 0.6
VAPBO95292 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.82■□□□□ 0.6
VAPBO95292 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VAPBO95292 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.82■□□□□ 0.6
VAPBO95292 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAPBO95292 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAPBO95292 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VAPBO95292 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.81■□□□□ 0.6
VAPBO95292 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VAPBO95292 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.81■□□□□ 0.6
VAPBO95292 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VAPBO95292 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
VAPBO95292 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.81■□□□□ 0.6
VAPBO95292 AC012618.2-201ENST00000428058 849 ntBASIC18.81■□□□□ 0.6
VAPBO95292 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 AC116562.2-201ENST00000507042 360 ntBASIC18.81■□□□□ 0.6
VAPBO95292 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.81■□□□□ 0.6
VAPBO95292 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.81■□□□□ 0.6
VAPBO95292 AC233702.5-201ENST00000584107 538 ntBASIC18.81■□□□□ 0.6
VAPBO95292 AP001412.1-201ENST00000608405 714 ntBASIC18.81■□□□□ 0.6
VAPBO95292 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 AC113410.3-201ENST00000623366 203 ntBASIC18.81■□□□□ 0.6
VAPBO95292 AL049637.2-201ENST00000641778 930 ntBASIC18.81■□□□□ 0.6
VAPBO95292 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.81■□□□□ 0.6
VAPBO95292 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.81■□□□□ 0.6
VAPBO95292 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.81■□□□□ 0.6
VAPBO95292 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAPBO95292 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VAPBO95292 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.8■□□□□ 0.6
VAPBO95292 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
VAPBO95292 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VAPBO95292 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VAPBO95292 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VAPBO95292 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.8■□□□□ 0.6
VAPBO95292 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.8■□□□□ 0.6
VAPBO95292 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VAPBO95292 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.8■□□□□ 0.6
VAPBO95292 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms