Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
LTN1O94822 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTN1O94822 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC24.81■■□□□ 1.56
LTN1O94822 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTN1O94822 VENTXP7-201ENST00000475503 772 ntBASIC24.81■■□□□ 1.56
LTN1O94822 RNA5SP419-201ENST00000515908 135 ntBASIC24.81■■□□□ 1.56
LTN1O94822 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC24.81■■□□□ 1.56
LTN1O94822 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC24.81■■□□□ 1.56
LTN1O94822 BNIP3P18-201ENST00000593976 575 ntBASIC24.81■■□□□ 1.56
LTN1O94822 AL121912.1-201ENST00000603683 238 ntBASIC24.81■■□□□ 1.56
LTN1O94822 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC24.81■■□□□ 1.56
LTN1O94822 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTN1O94822 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTN1O94822 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTN1O94822 HLA-A-201ENST00000376802 1334 ntBASIC24.81■■□□□ 1.56
LTN1O94822 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
LTN1O94822 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTN1O94822 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
LTN1O94822 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTN1O94822 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LTN1O94822 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
LTN1O94822 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
LTN1O94822 AP000593.1-201ENST00000393668 712 ntBASIC24.8■■□□□ 1.56
LTN1O94822 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
LTN1O94822 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LTN1O94822 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LTN1O94822 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LTN1O94822 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LTN1O94822 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LTN1O94822 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LTN1O94822 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
LTN1O94822 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LTN1O94822 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC24.8■■□□□ 1.56
LTN1O94822 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LTN1O94822 AC005332.3-201ENST00000589904 676 ntBASIC24.8■■□□□ 1.56
LTN1O94822 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.8■■□□□ 1.56
LTN1O94822 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
LTN1O94822 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
LTN1O94822 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC24.79■■□□□ 1.56
LTN1O94822 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTN1O94822 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTN1O94822 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTN1O94822 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTN1O94822 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.79■■□□□ 1.56
LTN1O94822 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTN1O94822 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC24.79■■□□□ 1.56
LTN1O94822 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
LTN1O94822 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTN1O94822 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTN1O94822 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.78■■□□□ 1.56
LTN1O94822 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
LTN1O94822 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LTN1O94822 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.78■■□□□ 1.56
LTN1O94822 AC009065.1-201ENST00000564055 1225 ntBASIC24.78■■□□□ 1.56
LTN1O94822 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC24.78■■□□□ 1.56
LTN1O94822 AL353801.3-201ENST00000609898 542 ntBASIC24.78■■□□□ 1.56
LTN1O94822 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LTN1O94822 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LTN1O94822 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LTN1O94822 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LTN1O94822 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.78■■□□□ 1.56
LTN1O94822 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LTN1O94822 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.77■■□□□ 1.56
LTN1O94822 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC24.77■■□□□ 1.56
LTN1O94822 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
LTN1O94822 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC24.77■■□□□ 1.56
LTN1O94822 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC24.77■■□□□ 1.56
LTN1O94822 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC24.77■■□□□ 1.56
LTN1O94822 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC24.77■■□□□ 1.56
LTN1O94822 MIR7706-201ENST00000613747 67 ntBASIC24.77■■□□□ 1.56
LTN1O94822 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC24.77■■□□□ 1.56
LTN1O94822 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
LTN1O94822 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.76■■□□□ 1.55
LTN1O94822 PENK-208ENST00000523051 772 ntTSL 5 BASIC24.76■■□□□ 1.55
LTN1O94822 AC091304.2-201ENST00000564639 760 ntBASIC24.76■■□□□ 1.55
LTN1O94822 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LTN1O94822 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC24.76■■□□□ 1.55
LTN1O94822 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.76■■□□□ 1.55
LTN1O94822 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
LTN1O94822 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LTN1O94822 AL353692.3-201ENST00000407031 1396 ntBASIC24.76■■□□□ 1.55
LTN1O94822 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
LTN1O94822 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LTN1O94822 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LTN1O94822 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms