Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PTP4A3O75365 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A3O75365 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A3O75365 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PTP4A3O75365 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.88■□□□□ 0.29
PTP4A3O75365 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PTP4A3O75365 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PTP4A3O75365 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A3O75365 AC011506.1-201ENST00000474329 610 ntBASIC16.88■□□□□ 0.29
PTP4A3O75365 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.88■□□□□ 0.29
PTP4A3O75365 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.88■□□□□ 0.29
PTP4A3O75365 RPPH1-201ENST00000516869 333 ntBASIC16.88■□□□□ 0.29
PTP4A3O75365 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.88■□□□□ 0.29
PTP4A3O75365 C1QBPP2-201ENST00000528754 825 ntBASIC16.88■□□□□ 0.29
PTP4A3O75365 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PTP4A3O75365 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTP4A3O75365 AC026271.3-201ENST00000571884 352 ntBASIC16.88■□□□□ 0.29
PTP4A3O75365 AC011298.2-201ENST00000617989 482 ntBASIC16.88■□□□□ 0.29
PTP4A3O75365 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A3O75365 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PTP4A3O75365 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.88■□□□□ 0.29
PTP4A3O75365 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A3O75365 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PTP4A3O75365 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTP4A3O75365 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A3O75365 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PTP4A3O75365 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PTP4A3O75365 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PTP4A3O75365 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTP4A3O75365 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PTP4A3O75365 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.87■□□□□ 0.29
PTP4A3O75365 RARRES2P10-201ENST00000564312 460 ntBASIC16.87■□□□□ 0.29
PTP4A3O75365 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 AF186192.3-201ENST00000583427 947 ntBASIC16.87■□□□□ 0.29
PTP4A3O75365 AC073195.1-201ENST00000607241 877 ntBASIC16.87■□□□□ 0.29
PTP4A3O75365 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.87■□□□□ 0.29
PTP4A3O75365 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.87■□□□□ 0.29
PTP4A3O75365 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.87■□□□□ 0.29
PTP4A3O75365 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A3O75365 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A3O75365 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A3O75365 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A3O75365 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A3O75365 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
PTP4A3O75365 RCC2P3-201ENST00000418112 1537 ntBASIC16.86■□□□□ 0.29
PTP4A3O75365 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A3O75365 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.86■□□□□ 0.29
PTP4A3O75365 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.86■□□□□ 0.29
PTP4A3O75365 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PTP4A3O75365 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A3O75365 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A3O75365 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A3O75365 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.86■□□□□ 0.29
PTP4A3O75365 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PTP4A3O75365 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.86■□□□□ 0.29
PTP4A3O75365 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A3O75365 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A3O75365 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A3O75365 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A3O75365 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A3O75365 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTP4A3O75365 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PTP4A3O75365 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PTP4A3O75365 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A3O75365 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A3O75365 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.85■□□□□ 0.29
PTP4A3O75365 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A3O75365 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.85■□□□□ 0.29
PTP4A3O75365 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A3O75365 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PTP4A3O75365 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PTP4A3O75365 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A3O75365 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.85■□□□□ 0.29
PTP4A3O75365 FAM207BP-201ENST00000447172 505 ntBASIC16.85■□□□□ 0.29
PTP4A3O75365 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms