Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TSPAN3O60637 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.29■□□□□ 0.68
TSPAN3O60637 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.29■□□□□ 0.68
TSPAN3O60637 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TSPAN3O60637 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.28■□□□□ 0.68
TSPAN3O60637 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.28■□□□□ 0.68
TSPAN3O60637 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.28■□□□□ 0.68
TSPAN3O60637 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.28■□□□□ 0.68
TSPAN3O60637 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.28■□□□□ 0.68
TSPAN3O60637 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TSPAN3O60637 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.28■□□□□ 0.68
TSPAN3O60637 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.28■□□□□ 0.68
TSPAN3O60637 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.28■□□□□ 0.68
TSPAN3O60637 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TSPAN3O60637 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN3O60637 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.28■□□□□ 0.68
TSPAN3O60637 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TSPAN3O60637 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.27■□□□□ 0.68
TSPAN3O60637 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.27■□□□□ 0.68
TSPAN3O60637 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN3O60637 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
TSPAN3O60637 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN3O60637 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN3O60637 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN3O60637 SPDYE15P-201ENST00000424157 909 ntBASIC19.27■□□□□ 0.68
TSPAN3O60637 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN3O60637 AC112907.2-201ENST00000448639 330 ntBASIC19.27■□□□□ 0.68
TSPAN3O60637 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.27■□□□□ 0.68
TSPAN3O60637 AL671277.2-201ENST00000458060 996 ntBASIC19.27■□□□□ 0.68
TSPAN3O60637 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.27■□□□□ 0.68
TSPAN3O60637 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.27■□□□□ 0.68
TSPAN3O60637 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.27■□□□□ 0.68
TSPAN3O60637 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.27■□□□□ 0.68
TSPAN3O60637 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.27■□□□□ 0.68
TSPAN3O60637 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN3O60637 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
TSPAN3O60637 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TSPAN3O60637 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.27■□□□□ 0.68
TSPAN3O60637 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN3O60637 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN3O60637 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TSPAN3O60637 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
TSPAN3O60637 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TSPAN3O60637 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TSPAN3O60637 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TSPAN3O60637 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.26■□□□□ 0.67
TSPAN3O60637 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.26■□□□□ 0.67
TSPAN3O60637 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TSPAN3O60637 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.26■□□□□ 0.67
TSPAN3O60637 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 AC112497.1-201ENST00000624824 639 ntBASIC19.26■□□□□ 0.67
TSPAN3O60637 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.26■□□□□ 0.67
TSPAN3O60637 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TSPAN3O60637 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.26■□□□□ 0.67
TSPAN3O60637 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN3O60637 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.25■□□□□ 0.67
TSPAN3O60637 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.25■□□□□ 0.67
TSPAN3O60637 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.25■□□□□ 0.67
TSPAN3O60637 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TSPAN3O60637 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.25■□□□□ 0.67
TSPAN3O60637 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TSPAN3O60637 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TSPAN3O60637 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.25■□□□□ 0.67
TSPAN3O60637 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 MIR564-202ENST00000385049 94 ntBASIC19.25■□□□□ 0.67
TSPAN3O60637 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms